RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SLC9B2Q86UD5 537 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ATPAF2Q8N5M1 289 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ANKRD20A12PQ8NF67 263 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 COX14Q96I36 57 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 TBC1D10AQ9BXI6 508 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ULBP3Q9BZM4 244 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 NT5MQ9NPB1 228 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PCYT1BQ9Y5K3 369 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 BSNQ9UPA5 3926 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 FLNCQ14315 2725 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 LGALS16A8MUM7 142 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 DNAJC6O75061 913 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 LRCH4O75427 683 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 KATNA1O75449 491 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 ACP5P13686 325 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 SLC2A4P14672 509 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 ZNF28P17035 718 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 ZNF30P17039 623 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 CD97P48960 835 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 EPHA4P54764 986 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 MAP7Q14244 749 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 SMTNL2Q2TAL5 461 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 PPP1R2P3Q6NXS1 205 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 C6orf15Q6UXA7 325 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 ASB18Q6ZVZ8 466 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 NLRP8Q86W28 1048 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 PLXDC1Q8IUK5 500 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 HSPH1Q92598 858 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 VPS18Q9P253 973 aa11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 OAS3Q9Y6K5 1087 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-207ENST00000435083 NBASA2RRP1 2371 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 A0A0J9YYE9 177 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 FZD6O60353 706 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 TRBC1P01850 177 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 FURINP09958 794 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 STC1P52823 247 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 CDH6P55285 790 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 TCTN3Q6NUS6 607 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 LYSMD3Q7Z3D4 306 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 IRF2BP2Q7Z5L9 587 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 CCDC13Q8IYE1 715 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 HERPUD2Q9BSE4 406 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 CPNE7Q9UBL6 633 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 LIMA1Q9UHB6 759 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 CROTQ9UKG9 612 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 POLHQ9Y253 713 aa11.48□□□□□ -0.57
CHRNA1-207ENST00000435083 KIR2DS5A0A0G2JLQ3 304 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 A0A0G2JNG1 304 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 CDC14CA4D256 554 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 KIR2DS3K7RE56 304 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 VPS4BO75351 444 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 CLDN7O95471 211 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 FTLP02792 175 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 F3P13726 295 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 IL1R2P27930 398 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 SEPHS1P49903 392 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 GFERP55789 205 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 KIR2DS5Q14953 304 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 DPYSL2Q16555 572 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 POLNQ7Z5Q5 900 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 RASGRP3Q8IV61 690 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 STAMBPL1Q96FJ0 436 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 ELMO2Q96JJ3 720 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 C9orf72Q96LT7 481 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 CSPG4P5Q96PW8 444 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 ERGIC2Q96RQ1 377 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 SYT11Q9BT88 431 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 EPB41L1Q9H4G0 881 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 PRDM8Q9NQV8 689 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 SIDT1Q9NXL6 827 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 MYO1AQ9UBC5 1043 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 TLK1Q9UKI8 766 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 CNOT6Q9ULM6 557 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 CHKBQ9Y259 395 aa11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 MN1Q10571 1320 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-207ENST00000435083 A6NCN8 305 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 OR5K4A6NMS3 321 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 RFPL1O75677 317 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 KIAA0754O94854 1291 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 AGFG2O95081 481 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 ANKRD34CP0C6C1 535 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 ATP1A3P13637 1013 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 TCF4P15884 667 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 TYRP1P17643 537 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 AMD1P17707 334 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 SERPINB6P35237 376 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 UQCRFS1P47985 274 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 DSC2Q02487 901 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 BOLA3Q53S33 107 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 TMEM135Q86UB9 458 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 PHYKPLQ8IUZ5 450 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 TEX26Q8N6G2 289 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
CHRNA1-207ENST00000435083 ZNF653Q96CK0 615 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms