RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SLC25A10Q9UBX3 287 aaPredicted RBP3.44□□□□□ -1.86
PTPN4-205ENST00000433888 ACAD8Q9UKU7 415 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 A4GNTQ9UNA3 340 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 SCINQ9Y6U3 715 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 PSMD14O00487 310 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 EIF3DO15371 548 aaKnown RBP eCLIP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 SPINT2O43291 252 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 TPD52L2O43399 206 aaKnown RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 EGFP01133 1207 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 IRF1P10914 325 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ZNF23P17027 643 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 SP100P23497 879 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 AHRP35869 848 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 APOBEC1P41238 236 aaKnown RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 GABRB2P47870 512 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 CLDN20P56880 219 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 TAS2R38P59533 333 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ITGA9Q13797 1035 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 TMEM187Q14656 261 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 C18orf63Q68DL7 685 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 SPINK14Q6IE38 97 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ZNF704Q6ZNC4 412 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ENAHQ8N8S7 591 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 SLC38A5Q8WUX1 472 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ZNF653Q96CK0 615 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ZNF689Q96CS4 500 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 PPP1R13BQ96KQ4 1090 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ART5Q96L15 291 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ZSCAN31Q96LW9 406 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 MPHOSPH8Q99549 860 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 PYM1Q9BRP8 204 aaKnown RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 H2AFJQ9BTM1 129 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 INTS2Q9H0H0 1204 aaKnown RBP3.43□□□□□ -1.86
PTPN4-205ENST00000433888 ZDHHC18Q9NUE0 388 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 HSF4Q9ULV5 492 aa3.43□□□□□ -1.86
PTPN4-205ENST00000433888 NCAM2O15394 837 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 TSHBP01222 138 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 SPOCK1Q08629 439 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 BRD3Q15059 726 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 STXBP4Q6ZWJ1 553 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 MAP7D3Q8IWC1 876 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 EXOC8Q8IYI6 725 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 ADSSL1Q8N142 457 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 POM121L2Q96KW2 1035 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 PSMD1Q99460 953 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 OPRPNQ99935 248 aaPredicted RBP3.42□□□□□ -1.86
PTPN4-205ENST00000433888 LTB4R2Q9NPC1 389 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 TCP11L1Q9NUJ3 509 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 ADPRHL2Q9NX46 363 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 UTYO14607 1347 aa3.42□□□□□ -1.86
PTPN4-205ENST00000433888 COL5A2P05997 1499 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 A0A1W2PP11 408 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 A0A1W2PPI3 338 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 GUCY1B2O75343 617 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 HOXB5P09067 269 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 CSF2RAP15509 400 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 PSMC2P35998 433 aaKnown RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 AMPHP49418 695 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 RHBDL3P58872 404 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 UFM1P61960 85 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 GRIK2Q13002 908 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 KIR2DS3Q14952 304 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 NFIL3Q16649 462 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 LRRC8DQ7L1W4 858 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 ATG9AQ7Z3C6 839 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 PIWIL4Q7Z3Z4 852 aaKnown RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 CPOQ8IVL8 374 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 ZNF440Q8IYI8 595 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 RBM15BQ8NDT2 890 aaKnown RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 HERVK_113Q902F9 699 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 APBB2Q92870 758 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 IFIH1Q9BYX4 1025 aaKnown RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 UBXN6Q9BZV1 441 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 PDZD7Q9H5P4 517 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 ACSS1Q9NUB1 689 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 TMEM181Q9P2C4 612 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 MARCH4Q9P2E8 410 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 CNOT7Q9UIV1 285 aaKnown RBP3.41□□□□□ -1.86
PTPN4-205ENST00000433888 RASAL2Q9UJF2 1139 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 FBXL2Q9UKC9 423 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 KLHL20Q9Y2M5 609 aa3.41□□□□□ -1.86
PTPN4-205ENST00000433888 A0A1W2PQM1 296 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 VCYO14598 125 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 TCERG1O14776 1098 aaKnown RBP3.4□□□□□ -1.87
PTPN4-205ENST00000433888 ARHGEF9O43307 516 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 UGT1A1P22309 533 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 PGM1P36871 562 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 NR2C2P49116 596 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 PLIN5Q00G26 463 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 USP41Q3LFD5 358 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 ZFP69Q49AA0 526 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 DCST1Q5T197 706 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 SIGIRRQ6IA17 410 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 SLC22A25Q6T423 547 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 NKAPQ8N5F7 415 aaKnown RBP3.4□□□□□ -1.87
PTPN4-205ENST00000433888 SLC44A1Q8WWI5 657 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 KLHL15Q96M94 604 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 MPHOSPH6Q99547 160 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms