RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SLC25A41Q8N5S1 370 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 TRAM1L1Q8N609 369 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 MDM1Q8TC05 714 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 ZDHHC1Q8WTX9 485 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
HDAC6-207ENST00000430858 CCDC74AQ96AQ1 378 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 LRRC45Q96CN5 670 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 SPATA13Q96N96 652 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 PLEKHG4BQ96PX9 1271 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 ALS2CR12Q96Q35 445 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 FAM118BQ9BPY3 351 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 CCDC3Q9BQI4 270 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC6-207ENST00000430858 TAAR2Q9P1P5 351 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 APPL1Q9UKG1 709 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 GPSM3Q9Y4H4 160 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 SPO11Q9Y5K1 396 aa9.74□□□□□ -0.85
HDAC6-207ENST00000430858 KNTC1P50748 2209 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 C5orf60A6NFR6 353 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 SRRM3A6NNA2 597 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 GPR89AB7ZAQ6 455 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 TAF4O00268 1085 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 AURKAO14965 403 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 NUDT21O43809 227 aaKnown RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 PPFIA2O75334 1257 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 CSO75390 466 aaKnown RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 SLC25A14O95258 325 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 GPR89BP0CG08 455 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 AK4P27144 223 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 PSMB4P28070 264 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 ACTR1BP42025 376 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 ACTR1AP61163 376 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 SPIDRQ14159 915 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 ISXQ2M1V0 245 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 CERCAMQ5T4B2 595 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 SLC30A9Q6PML9 568 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 GLT6D1Q7Z4J2 308 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 C17orf82Q86X59 251 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 PHYKPLQ8IUZ5 450 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 TTC30BQ8N4P2 665 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 SLC35B2Q8TB61 432 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 CCDC110Q8TBZ0 833 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 DTX3LQ8TDB6 740 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 BLOC1S5Q8TDH9 187 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 GLYATL1Q969I3 302 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 GORASP1Q9BQQ3 440 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 FICDQ9BVA6 458 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 FRMD8P1Q9BZ68 369 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 CARD9Q9H257 536 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 TRIM39Q9HCM9 518 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 SPATS2LQ9NUQ6 558 aaKnown RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 LRIT1Q9P2V4 623 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 ZNHIT2Q9UHR6 403 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 PKP3Q9Y446 797 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 OAS3Q9Y6K5 1087 aaKnown RBP9.73□□□□□ -0.85
HDAC6-207ENST00000430858 AK5Q9Y6K8 562 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 LRP4O75096 1905 aa9.73□□□□□ -0.85
HDAC6-207ENST00000430858 GOLGA4Q13439 2230 aaKnown RBP9.72□□□□□ -0.85
HDAC6-207ENST00000430858 ZW10O43264 779 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 GRID2O43424 1007 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 VEGFDO43915 354 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 NUAK1O60285 661 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 ECEL1O95672 775 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 AGTP01019 485 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 RPLP0P05388 317 aaKnown RBP9.72□□□□□ -0.85
HDAC6-207ENST00000430858 STIP1P31948 543 aaKnown RBP9.72□□□□□ -0.85
HDAC6-207ENST00000430858 ADRA1AP35348 466 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 SPAM1P38567 509 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 CCZ1BP86790 482 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 CCZ1P86791 482 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-207ENST00000430858 RPS6KA1Q15418 735 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 PARP6Q2NL67 630 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 MEI1Q5TIA1 1274 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 RANBP10Q6VN20 620 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 CCNJLQ8IV13 435 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 KLHDC8BQ8IXV7 354 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 LSMEM2Q8N112 164 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 NAGSQ8N159 534 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 FAM71DQ8N9W8 422 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 VPS35Q96QK1 796 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 GFM1Q96RP9 751 aaKnown RBP9.72□□□□□ -0.85
HDAC6-207ENST00000430858 LRRN3Q9H3W5 708 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 SYNDIG1Q9H7V2 258 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 GRPEL1Q9HAV7 217 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 BPIFA1Q9NP55 256 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 IL26Q9NPH9 171 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 LZTFL1Q9NQ48 299 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 IL17CQ9P0M4 197 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 ATXN10Q9UBB4 475 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 FEZ2Q9UHY8 353 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-207ENST00000430858 R3HDM2Q9Y2K5 976 aaKnown RBP9.72□□□□□ -0.85
HDAC6-207ENST00000430858 PCDHB1Q9Y5F3 818 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 ST14Q9Y5Y6 855 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 RNF215Q9Y6U7 377 aa9.72□□□□□ -0.85
HDAC6-207ENST00000430858 A0A1W2PQM1 296 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 TCRBV7S2A1N4TA0A589 114 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 C2orf81A6NN90 581 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 RHPN2P1A8MT19 583 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms