RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 RGL4Q8IZJ4 473 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ZBTB8BQ8NAP8 495 aaPredicted RBP16.4■□□□□ 0.22
RIF1-204ENST00000430328 DNASE1L2Q92874 299 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 SERPINB11Q96P15 392 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 C19orf81C9J6K1 198 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ZNF543Q08ER8 600 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 HSDL2Q6YN16 418 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 VANGL1Q8TAA9 524 aaPredicted RBP16.4■□□□□ 0.22
RIF1-204ENST00000430328 CSGALNACT1Q8TDX6 532 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 UMODL1Q5DID0 1318 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ZNF705EA8MWA4 302 aaPredicted RBP16.4■□□□□ 0.22
RIF1-204ENST00000430328 HDAC3O15379 428 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 MTFR2Q6P444 385 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 MPZL3Q6UWV2 235 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 RDH11Q8TC12 318 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 TBCBQ99426 244 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 MAB21L2Q9Y586 359 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 PCDHB12Q9Y5F1 795 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 PPP1R3GB7ZBB8 358 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ACADVLP49748 655 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 TBX2Q13207 712 aaPredicted RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 SCGB2B2Q4G0G5 96 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 SLC44A3Q8N4M1 653 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ZNF557Q8N988 423 aaPredicted RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 CXorf40AQ8TE69 158 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 RHPN2P1A8MT19 583 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 NDUFS2O75306 463 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ZNF3P17036 446 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 LCN1P31025 176 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 PAN2Q504Q3 1202 aaKnown RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 EDEM1Q92611 657 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ZYG11BQ9C0D3 744 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 EQTNQ9NQ60 294 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 SMPD3Q9NY59 655 aaPredicted RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.211e-7■■■■□ 20.8
RIF1-204ENST00000430328 A0A0G2JMP0 313 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 GSC2O15499 205 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.212e-8■■□□□ 12.3
RIF1-204ENST00000430328 ZNF565Q8N9K5 539 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 OR2T12Q8NG77 320 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 OR4M2Q8NGB6 313 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 BRSK1Q8TDC3 778 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 BPIFB1Q8TDL5 484 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 SEC14L1Q92503 715 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 BLOC1S4Q9NUP1 217 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 C1orf109Q9NX04 203 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 COMMD3Q9UBI1 195 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 PACSIN3Q9UKS6 424 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ISPDA4D126 451 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 MATN4O95460 622 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 PRKCHP24723 683 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 PTPN11Q06124 597 aaPredicted RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 ADAM15Q13444 863 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 BATFQ16520 125 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 KLHL22Q53GT1 634 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 CASZ1Q86V15 1759 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 OR2T34Q8NGX1 318 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 OR2T3Q8NH03 318 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 CLPTM1LQ96KA5 538 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 PCDHGB7Q9Y5F8 929 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 MOXD2PA6NHM9 499 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ZNF878C9JN71 531 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 TNFRSF11BO00300 401 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 DNAAF5Q86Y56 855 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ZNF431Q8TF32 576 aaPredicted RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 C19orf12Q9NSK7 152 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 SPATA7Q9P0W8 599 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 NOP16Q9Y3C1 178 aaKnown RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 MYL6P60660 151 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 C9orf64Q5T6V5 341 aa16.39■□□□□ 0.21
RIF1-204ENST00000430328 ZNF517Q6ZMY9 492 aaPredicted RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 PSTKQ8IV42 348 aaKnown RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
RIF1-204ENST00000430328 TEX14Q8IWB6 1497 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 MAP3K8P41279 467 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 RAB10P61026 200 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 CHAF1BQ13112 559 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 PDK4Q16654 411 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 BEND4Q6ZU67 534 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 CYP2U1Q7Z449 544 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 CIB1Q99828 191 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 BARX2Q9UMQ3 279 aaPredicted RBP16.38■□□□□ 0.21
RIF1-204ENST00000430328 BTRCQ9Y297 605 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 C13orf42A0A1B0GVH6 325 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 SNAPC2Q13487 334 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 UAP1L1Q3KQV9 507 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 SPATA19Q7Z5L4 167 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 GPSM3Q9Y4H4 160 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 RPLP2P05387 115 aaKnown RBP16.38■□□□□ 0.21
RIF1-204ENST00000430328 EPCAMP16422 314 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 KCNT2Q6UVM3 1135 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 ADAMTS15Q8TE58 950 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms