RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ZNF765Q7L2R6 523 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 SLC9B2Q86UD5 537 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 ESX1Q8N693 406 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 HSPH1Q92598 858 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 MIB2Q96AX9 1013 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 RNF31Q96EP0 1072 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 COX14Q96I36 57 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 CNOT8Q9UFF9 292 aaKnown RBP18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 PCYT1BQ9Y5K3 369 aaPredicted RBP18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 RPS6KL1Q9Y6S9 549 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 MTSS1O43312 755 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 ATP1A1P05023 1023 aaKnown RBP18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 ATP1A3P13637 1013 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 ACP5P13686 325 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 ZNF30P17039 623 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 STC1P52823 247 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 EPHA4P54764 986 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 DPYSL2Q16555 572 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 IYDQ6PHW0 289 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 POLNQ7Z5Q5 900 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 ATCAYQ86WG3 371 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 CSPG4P5Q96PW8 444 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 PSMG3-AS1Q96PY0 264 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 HERPUD2Q9BSE4 406 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 SYT11Q9BT88 431 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 ULBP3Q9BZM4 244 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 KCTD3Q9Y597 815 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 PCDHB3Q9Y5E6 796 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 KCNMB2Q9Y691 235 aa18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 OAS3Q9Y6K5 1087 aaKnown RBP18.14■□□□□ 0.49
UPK3BP1-201ENST00000428678 A0A0J9YYE9 177 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 MKRN2OSH3BPM6 223 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 DNAJC6O75061 913 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 TRBC1P01850 177 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 SLC2A4P14672 509 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 IL1R2P27930 398 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 FOXM1Q08050 763 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 CRTC2Q53ET0 693 aaPredicted RBP18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 C4orf17Q53FE4 359 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 NLRP8Q86W28 1048 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 TEX19Q8NA77 164 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 ZNF653Q96CK0 615 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 TBC1D10AQ9BXI6 508 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 EPB41L1Q9H4G0 881 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 LRRC4CQ9HCJ2 640 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 VPS18Q9P253 973 aa18.13■□□□□ 0.49
UPK3BP1-201ENST00000428678 FZD6O60353 706 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 FTLP02792 175 aaPredicted RBP18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 CDK11BP21127 795 aaKnown RBP18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 F8A1P23610 371 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 SERPINB6P35237 376 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 PCK1P35558 622 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 DLSTP36957 453 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 MAP7Q14244 749 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 LYSMD3Q7Z3D4 306 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 PLXDC1Q8IUK5 500 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 POLR1EQ9GZS1 481 aaKnown RBP18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 SIDT1Q9NXL6 827 aaKnown RBP18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 MYO1AQ9UBC5 1043 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 CPNE7Q9UBL6 633 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 CROTQ9UKG9 612 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 DNPEPQ9ULA0 475 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 SCINQ9Y6U3 715 aa18.12■□□□□ 0.49
UPK3BP1-201ENST00000428678 CREBBPQ92793 2442 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 KIR2DS5A0A0G2JLQ3 304 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 A0A0G2JNG1 304 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 A6NCN8 305 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 K7EM74 188 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 KIR2DS3K7RE56 304 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 CLDN7O95471 211 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 KRT7P08729 469 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 F3P13726 295 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 TCF4P15884 667 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 MLLT10P55197 1068 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 GFERP55789 205 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 MYL5Q02045 173 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 ERV3-1Q14264 604 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 KIR2DS5Q14953 304 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 BOLA3Q53S33 107 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 C6orf15Q6UXA7 325 aaPredicted RBP18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 CNOT6Q9ULM6 557 aaKnown RBP18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 CHKBQ9Y259 395 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 TTLL3Q9Y4R7 772 aa18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 MN1Q10571 1320 aaPredicted RBP18.11■□□□□ 0.49
UPK3BP1-201ENST00000428678 ITPR2Q14571 2701 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 LILRA5A6NI73 299 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 KATNA1O75449 491 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 ANKRD34CP0C6C1 535 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 ZNF28P17035 718 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 CD97P48960 835 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 DSC2Q02487 901 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 TCTN3Q6NUS6 607 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 ASB18Q6ZVZ8 466 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 PHYKPLQ8IUZ5 450 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 TEX26Q8N6G2 289 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 AVL9Q8NBF6 648 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms