RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 TNNT3P45378 269 aaPredicted RBP16.56■□□□□ 0.24
VRK2-204ENST00000428021 CAMK2BQ13554 666 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 SPARCL1Q14515 664 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 PARP6Q2NL67 630 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 PYCR3Q53H96 274 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 PERM1Q5SV97 790 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 KCTD11Q693B1 232 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 DENND5AQ6IQ26 1287 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 UNQ6494/PRO21346Q6UXR6 183 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 EFL1Q7Z2Z2 1120 aaKnown RBP16.56■□□□□ 0.24
VRK2-204ENST00000428021 TRAM1L1Q8N609 369 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 ARL10Q8N8L6 244 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 FAM46DQ8NEK8 389 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 GPR156Q8NFN8 814 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 BLOC1S5Q8TDH9 187 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 GLMNQ92990 594 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 APOL2Q9BQE5 337 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 ZSCAN5AQ9BUG6 496 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 SPATS2LQ9NUQ6 558 aaKnown RBP16.56■□□□□ 0.24
VRK2-204ENST00000428021 EVA1BQ9NVM1 165 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 IL17CQ9P0M4 197 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 VPS18Q9P253 973 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 GULP1Q9UBP9 304 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 TMPRSS11EQ9UL52 423 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 PADI4Q9UM07 663 aa16.56■□□□□ 0.24
VRK2-204ENST00000428021 COL27A1Q8IZC6 1860 aaPredicted RBP16.55■□□□□ 0.24
VRK2-204ENST00000428021 NOBOXO60393 691 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 USP12O75317 370 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 CAPNS1P04632 268 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 JUPP14923 745 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 AK4P27144 223 aaPredicted RBP16.55■□□□□ 0.24
VRK2-204ENST00000428021 RPIAP49247 311 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 CTBSQ01459 385 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 ZNF648Q5T619 568 aaPredicted RBP16.55■□□□□ 0.24
VRK2-204ENST00000428021 CDCP2Q5VXM1 449 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 ARHGEF18Q6ZSZ5 1173 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 MARK2Q7KZI7 788 aaKnown RBP16.55■□□□□ 0.24
VRK2-204ENST00000428021 PPP1R2P1Q96PQ5 205 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 PLEKHG4BQ96PX9 1271 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 OR2M4Q96R27 311 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 ARNT2Q9HBZ2 717 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 ARFGAP3Q9NP61 516 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 IL26Q9NPH9 171 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 EPG5Q9HCE0 2579 aa16.55■□□□□ 0.24
VRK2-204ENST00000428021 DMXL2Q8TDJ6 3036 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 GAPDHSO14556 408 aaPredicted RBP16.54■□□□□ 0.24
VRK2-204ENST00000428021 CASC3O15234 703 aaKnown RBP16.54■□□□□ 0.24
VRK2-204ENST00000428021 BUD23O43709 281 aaKnown RBP16.54■□□□□ 0.24
VRK2-204ENST00000428021 ASMTLO95671 621 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 PROS1P07225 676 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 STIP1P31948 543 aaKnown RBP16.54■□□□□ 0.24
VRK2-204ENST00000428021 ILF3Q12906 894 aaKnown RBP eCLIP16.54■□□□□ 0.24
VRK2-204ENST00000428021 TARDBPQ13148 414 aaKnown RBP eCLIP16.54■□□□□ 0.24
VRK2-204ENST00000428021 SNX1Q13596 522 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 PTPRCAPQ14761 206 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 ZNF569Q5MCW4 686 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 PDPK2PQ6A1A2 396 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 GLT6D1Q7Z4J2 308 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 CACTIN-AS1Q8N1I8 211 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 NAT6Q93015 286 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 GLYATL1Q969I3 302 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 TBL1YQ9BQ87 522 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 GSDMCQ9BYG8 508 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 TAAR2Q9P1P5 351 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 ATXN10Q9UBB4 475 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 RABGEF1Q9UJ41 708 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 GPSM3Q9Y4H4 160 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 ARL5AQ9Y689 179 aa16.54■□□□□ 0.24
VRK2-204ENST00000428021 ZFC3H1O60293 1989 aaKnown RBP16.54■□□□□ 0.24
VRK2-204ENST00000428021 SLC25A14O95258 325 aaPredicted RBP16.53■□□□□ 0.24
VRK2-204ENST00000428021 MT-CO3P00414 261 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 CXCR5P32302 372 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 CA5AP35218 305 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 HLTFQ14527 1009 aaKnown RBP eCLIP16.53■□□□□ 0.24
VRK2-204ENST00000428021 CCNG2Q16589 344 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 P3H1Q32P28 736 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 ATP13A5Q4VNC0 1218 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 KHDC1Q4VXA5 237 aaKnown RBP16.53■□□□□ 0.24
VRK2-204ENST00000428021 SLC30A9Q6PML9 568 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 ADGRG6Q86SQ4 1221 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 PRUNE1Q86TP1 453 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 C17orf82Q86X59 251 aaPredicted RBP16.53■□□□□ 0.24
VRK2-204ENST00000428021 GALNT13Q8IUC8 556 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 DCBLD1Q8N8Z6 715 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 MAPK15Q8TD08 544 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 DTX3LQ8TDB6 740 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 VPS35Q96QK1 796 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 DPEP2Q9H4A9 486 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 TRIM39Q9HCM9 518 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 ZNHIT2Q9UHR6 403 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 CLCA2Q9UQC9 943 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 ZNF148Q9UQR1 794 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 PRKAB1Q9Y478 270 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 KCTD3Q9Y597 815 aa16.53■□□□□ 0.24
VRK2-204ENST00000428021 USP24Q9UPU5 2620 aa16.52■□□□□ 0.24
VRK2-204ENST00000428021 B4DGG1 531 aa16.52■□□□□ 0.24
VRK2-204ENST00000428021 NUAK1O60285 661 aa16.52■□□□□ 0.24
VRK2-204ENST00000428021 CEP104O60308 925 aa16.52■□□□□ 0.24
VRK2-204ENST00000428021 FGGP02679 453 aa16.52■□□□□ 0.24
VRK2-204ENST00000428021 ETS1P14921 441 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms