RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 NME5P56597 212 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 PLIN5Q00G26 463 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 SEL1L3Q68CR1 1132 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 NANOGNBQ7Z5D8 188 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 KCNMB4Q86W47 210 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 STK40Q8N2I9 435 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 ZNF786Q8N393 782 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 PHF21BQ96EK2 531 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 TUBGCP5Q96RT8 1024 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 EML4Q9HC35 981 aaKnown RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 TAS2R1Q9NYW7 299 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 LRRC42Q9Y546 428 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 A0A1B0GUL6 1792 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 FAM95CA0A1B0GW59 222 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 H0Y858 1186 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 H3BNC9 293 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 TULP3O75386 442 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 THRAP10827 490 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 CES1P23141 567 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 NTSR1P30989 418 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 NPY2RP49146 381 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 EIF2B2P49770 351 aaKnown RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 SF1Q15637 639 aaKnown RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 TRIM16LQ309B1 348 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 FAM109BQ6ICB4 259 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 UNC5AQ6ZN44 842 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 SLC35B2Q8TB61 432 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 HDAC10Q969S8 669 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 VMP1Q96GC9 406 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 ACOX2Q99424 681 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 EBNA1BP2Q99848 306 aaKnown RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 CCDC90BQ9GZT6 254 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 FANCEQ9HB96 536 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 CIDEBQ9UHD4 219 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 NUMBLQ9Y6R0 609 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 C5orf58C9J3I9 102 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 AXIN1O15169 862 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 TPD52L2O43399 206 aaKnown RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 AKAP10O43572 662 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 MMP20O60882 483 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 OAZ2O95190 189 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 TFE3P19532 575 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 IVDP26440 423 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 GNPDA1P46926 289 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 GPX6P59796 221 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 HPCAP84074 193 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 BNC2Q6ZN30 1099 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 RAVER1Q8IY67 606 aaKnown RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 RTL3Q8N8U3 475 aaKnown RBP10.61□□□□□ -0.71
TCOF1-204ENST00000427724 BANPQ8N9N5 519 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 LRRC39Q96DD0 335 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 GLOD4Q9HC38 313 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.61□□□□□ -0.719e-6■■□□□ 12.8
TCOF1-204ENST00000427724 PLLPQ9Y342 182 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
TCOF1-204ENST00000427724 SMIM31A0A1B0GVY4 71 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 BTN3A1O00481 513 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 FAM58BPP0C7Q3 252 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 MC4RP32245 332 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 CDK7P50613 346 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 CBX3Q13185 183 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 DRICH1Q6PGQ1 229 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 KYAT3Q6YP21 454 aaKnown RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 SATL1Q86VE3 508 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 TMEM25Q86YD3 366 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 NAT14Q8WUY8 206 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 COL26A1Q96A83 441 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 SDCBP2Q9H190 292 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 NENFQ9UMX5 172 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 MAGEB16A2A368 324 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 ANGPT2O15123 496 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 FTH1P02794 183 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 MAPK10P53779 464 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 AIF1P55008 147 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 PKNOX1P55347 436 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 AP1S1P61966 158 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 CYP2A13Q16696 494 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 ANKS6Q68DC2 871 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 CMC1Q7Z7K0 106 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 DHDDSQ86SQ9 333 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 SNX32Q86XE0 403 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 CFAP206Q8IYR0 622 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 PLD5Q8N7P1 536 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 RPLP0P6Q8NHW5 317 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 SUV39H2Q9H5I1 410 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 ZNF395Q9H8N7 513 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 ACSS2Q9NR19 701 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 FBXW11Q9UKB1 542 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 PCDHGC3Q9UN70 934 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 A0A1W2PQ67 120 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 UGT1A9O60656 530 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 FGF1P05230 155 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 FAM163BP0C2L3 166 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 HLA-DPA1P20036 260 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 RPL5P46777 297 aaKnown RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 DMPKQ09013 629 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 KLF1Q13351 362 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 C1orf61Q13536 156 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms