RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 SLC5A2P31639 672 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 COL9A2Q14055 689 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-212ENST00000426343 PRKD1Q15139 912 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-212ENST00000426343 SPA17Q15506 151 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 AMZ1Q400G9 498 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 CCDC70Q6NSX1 233 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 SPOCD1Q6ZMY3 1216 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 LYSMD3Q7Z3D4 306 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 TMPRSS9Q7Z410 1059 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 KATNAL2Q8IYT4 538 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 RCOR2Q8IZ40 523 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 SNRNP27Q8WVK2 155 aaKnown RBP17.62■□□□□ 0.41
HDLBP-212ENST00000426343 TFB1MQ8WVM0 346 aaKnown RBP17.62■□□□□ 0.41
HDLBP-212ENST00000426343 PATE1Q8WXA2 126 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 ACSL6Q9UKU0 697 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 OAS3Q9Y6K5 1087 aaKnown RBP17.62■□□□□ 0.41
HDLBP-212ENST00000426343 ATRXP46100 2492 aa17.62■□□□□ 0.41
HDLBP-212ENST00000426343 SMG1Q96Q15 3661 aaKnown RBP17.61■□□□□ 0.41
HDLBP-212ENST00000426343 A0A0A6YYK5 440 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-212ENST00000426343 PPM1DO15297 605 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 MTSS1O43312 755 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 NDST3O95803 873 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 ATP1A1P05023 1023 aaKnown RBP17.61■□□□□ 0.41
HDLBP-212ENST00000426343 HGFP14210 728 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 FASLGP48023 281 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 DCDC1P59894 354 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 MAP9Q49MG5 647 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 TFDP3Q5H9I0 405 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 USP53Q70EK8 1073 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 B4GALNT4Q76KP1 1039 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 KDELC2Q7Z4H8 507 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 DPYSL5Q9BPU6 564 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 CARD9Q9H257 536 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 SEMA6CQ9H3T2 930 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 RDH14Q9HBH5 336 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 CPNE5Q9HCH3 593 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 LUC7LQ9NQ29 371 aaKnown RBP17.61■□□□□ 0.41
HDLBP-212ENST00000426343 AKAP7Q9P0M2 348 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-212ENST00000426343 NFKBIL1Q9UBC1 381 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-212ENST00000426343 SAE1Q9UBE0 346 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-212ENST00000426343 PISDQ9UG56 409 aa17.61■□□□□ 0.41
HDLBP-212ENST00000426343 PTPRQQ9UMZ3 2332 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 MT-CYBP00156 380 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-212ENST00000426343 CYLC1P35663 651 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-212ENST00000426343 VAC14Q08AM6 782 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 WASHC5Q12768 1159 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 CLN3Q13286 438 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 PCSK7Q16549 785 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 FAM182AQ5T1J6 154 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 PHF19Q5T6S3 580 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 KAZNQ674X7 775 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 PDPK2PQ6A1A2 396 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 ZNF574Q6ZN55 896 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-212ENST00000426343 JAMLQ86YT9 394 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 SFRP1Q8N474 314 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 TRAM1L1Q8N609 369 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 SPATA22Q8NHS9 363 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 CALR3Q96L12 384 aaKnown RBP17.6■□□□□ 0.41
HDLBP-212ENST00000426343 ZSCAN5AQ9BUG6 496 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 GPR63Q9BZJ6 419 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 B3GNT4Q9C0J1 378 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.6■□□□□ 0.41
HDLBP-212ENST00000426343 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.6■□□□□ 0.41
HDLBP-212ENST00000426343 PCYT1BQ9Y5K3 369 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-212ENST00000426343 SHROOM3Q8TF72 1996 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 BPTFQ12830 3046 aa17.6■□□□□ 0.41
HDLBP-212ENST00000426343 IGHV1OR21-1A0A087WYE8 117 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 GPR89AB7ZAQ6 455 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-212ENST00000426343 NUAK1O60285 661 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 PMPCBO75439 489 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 EPOP01588 193 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 GPR89BP0CG08 455 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 PECAM1P16284 738 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-212ENST00000426343 CD68P34810 354 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-212ENST00000426343 GPLD1P80108 840 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 RHDQ02161 417 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 TRA2AQ13595 282 aaKnown RBP eCLIP17.59■□□□□ 0.41
HDLBP-212ENST00000426343 ARHGAP40Q5TG30 622 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 C11orf63Q6NUN7 778 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 CHST15Q7LFX5 561 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-212ENST00000426343 GPR26Q8NDV2 337 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 OR4D9Q8NGE8 314 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 SLC37A2Q8TED4 501 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 SLC39A7Q92504 469 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 P3H4Q92791 437 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 PANX2Q96RD6 677 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 VAT1Q99536 393 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 NUDT22Q9BRQ3 303 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 SPATA16Q9BXB7 569 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 GOLPH3Q9H4A6 298 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 TRIM39Q9HCM9 518 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 FAM153AQ9UHL3 310 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 ZNF711Q9Y462 761 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 PRKAB1Q9Y478 270 aa17.59■□□□□ 0.41
HDLBP-212ENST00000426343 hCG_1818297A0A087WSY0 165 aa17.58■□□□□ 0.4
HDLBP-212ENST00000426343 IGHV5-10-1A0A0J9YXX1 117 aa17.58■□□□□ 0.4
HDLBP-212ENST00000426343 LOC285095A0A1B0GVY8 99 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms