RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 GALNT13Q8IUC8 556 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 LRRC8AQ8IWT6 810 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 GPR26Q8NDV2 337 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 PTCD2Q8WV60 388 aaKnown RBP18.33■□□□□ 0.52
MSH5-207ENST00000425703 SPATA13Q96N96 652 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 FSD1LQ9BXM9 530 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 TAAR2Q9P1P5 351 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 PACSIN2Q9UNF0 486 aaPredicted RBP18.33■□□□□ 0.52
MSH5-207ENST00000425703 AAR2Q9Y312 384 aaKnown RBP18.33■□□□□ 0.52
MSH5-207ENST00000425703 SPO11Q9Y5K1 396 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 ASXL3Q9C0F0 2248 aa18.33■□□□□ 0.52
MSH5-207ENST00000425703 ACACAQ13085 2346 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 NTN3O00634 580 aaPredicted RBP18.32■□□□□ 0.52
MSH5-207ENST00000425703 KCNN4O15554 427 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 DNAJC6O75061 913 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 CSO75390 466 aaKnown RBP18.32■□□□□ 0.52
MSH5-207ENST00000425703 ISXQ2M1V0 245 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 ZNF569Q5MCW4 686 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 TRIM74Q86UV6 250 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 IPMKQ8NFU5 416 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 CCDC74AQ96AQ1 378 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 SPATA16Q9BXB7 569 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 C10orf88Q9H8K7 445 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 SPATS2LQ9NUQ6 558 aaKnown RBP18.32■□□□□ 0.52
MSH5-207ENST00000425703 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.32■□□□□ 0.52
MSH5-207ENST00000425703 GUCA1BQ9UMX6 200 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 GPSM3Q9Y4H4 160 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 DMXL2Q8TDJ6 3036 aa18.32■□□□□ 0.52
MSH5-207ENST00000425703 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 B4DGG1 531 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 PPFIA2O75334 1257 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 ASMTLO95671 621 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 CCDC175P0C221 793 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 BPIP17213 487 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 SPIDRQ14159 915 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 PRPSAP1Q14558 356 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 RANBP10Q6VN20 620 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 GLYATL1Q969I3 302 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 GORASP1Q9BQQ3 440 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 CARD9Q9H257 536 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 ST14Q9Y5Y6 855 aa18.31■□□□□ 0.52
MSH5-207ENST00000425703 OAS3Q9Y6K5 1087 aaKnown RBP18.31■□□□□ 0.52
MSH5-207ENST00000425703 PKD1L2Q7Z442 2459 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 AURKAO14965 403 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 ZZEF1O43149 2961 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 NRDCO43847 1150 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 ATP1A1P05023 1023 aaKnown RBP18.3■□□□□ 0.52
MSH5-207ENST00000425703 AK4P27144 223 aaPredicted RBP18.3■□□□□ 0.52
MSH5-207ENST00000425703 ADRA1AP35348 466 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 CHRNA4P43681 627 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 SLC30A9Q6PML9 568 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 ZNF438Q7Z4V0 828 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 KLHDC8BQ8IXV7 354 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 LSMEM2Q8N112 164 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 TTC30BQ8N4P2 665 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 SLC25A41Q8N5S1 370 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 SLC35B2Q8TB61 432 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 ZDHHC1Q8WTX9 485 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 VPS35Q96QK1 796 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 FAM118BQ9BPY3 351 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 FRMD8P1Q9BZ68 369 aaPredicted RBP18.3■□□□□ 0.52
MSH5-207ENST00000425703 SUDS3Q9H7L9 328 aaPredicted RBP18.3■□□□□ 0.52
MSH5-207ENST00000425703 TRIM39Q9HCM9 518 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 LRIT1Q9P2V4 623 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 RABGEF1Q9UJ41 708 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 PCDHB1Q9Y5F3 818 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 AK5Q9Y6K8 562 aa18.3■□□□□ 0.52
MSH5-207ENST00000425703 F5H423 210 aaPredicted RBP18.29■□□□□ 0.52
MSH5-207ENST00000425703 TMX2-CTNND1H3BSU7 103 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 ZW10O43264 779 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 NUAK1O60285 661 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 USP12O75317 370 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 SLC25A14O95258 325 aaPredicted RBP18.29■□□□□ 0.52
MSH5-207ENST00000425703 SLC4A1P02730 911 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 ACTR1BP42025 376 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 LSSP48449 732 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 ACTR1AP61163 376 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 NR1D2Q14995 579 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 ALS2CLQ60I27 953 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 MARK2Q7KZI7 788 aaKnown RBP18.29■□□□□ 0.52
MSH5-207ENST00000425703 GLT6D1Q7Z4J2 308 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 PHYKPLQ8IUZ5 450 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 CCDC110Q8TBZ0 833 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 LRRC45Q96CN5 670 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 ALS2CR12Q96Q35 445 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 C19orf43Q9BQ61 176 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 LRRN3Q9H3W5 708 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 IL17CQ9P0M4 197 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 ZNHIT2Q9UHR6 403 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 RNF215Q9Y6U7 377 aa18.29■□□□□ 0.52
MSH5-207ENST00000425703 D6RAR5 112 aa18.28■□□□□ 0.52
MSH5-207ENST00000425703 CHUKO15111 745 aa18.28■□□□□ 0.52
MSH5-207ENST00000425703 VEGFDO43915 354 aa18.28■□□□□ 0.52
MSH5-207ENST00000425703 DXOO77932 396 aaKnown RBP18.28■□□□□ 0.52
MSH5-207ENST00000425703 AGTP01019 485 aa18.28■□□□□ 0.52
MSH5-207ENST00000425703 RPLP0P05388 317 aaKnown RBP18.28■□□□□ 0.52
MSH5-207ENST00000425703 PSMB4P28070 264 aa18.28■□□□□ 0.52
MSH5-207ENST00000425703 CLPPQ16740 277 aaPredicted RBP18.28■□□□□ 0.52
MSH5-207ENST00000425703 PARP6Q2NL67 630 aa18.28■□□□□ 0.52
MSH5-207ENST00000425703 SEL1L2Q5TEA6 688 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms