RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PADI1Q9ULC6 663 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TTLL3Q9Y4R7 772 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SMG1Q96Q15 3661 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 A0A0J9YYE9 177 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 GPR89AB7ZAQ6 455 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 GOLGA6L22H0YM25 854 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RASSF9O75901 435 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RECKO95980 971 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TRBC1P01850 177 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 GPR89BP0CG08 455 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 F3P13726 295 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LHCGRP22888 699 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 VARSP26640 1264 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ARL4DP49703 201 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PTSQ03393 145 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KLHL30Q0D2K2 578 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 DPYSQ14117 519 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 DPYSL2Q16555 572 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 IFI16Q16666 785 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FHL5Q5TD97 284 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KLHL35Q6PF15 583 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ASB18Q6ZVZ8 466 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 POLNQ7Z5Q5 900 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TSPAN33Q86UF1 283 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 BPHLQ86WA6 291 aaPredicted RBP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ZNF761Q86XN6 746 aaPredicted RBP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RBM12BQ8IXT5 1001 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 UNC5BQ8IZJ1 945 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PELI3Q8N2H9 469 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NPWQ8N729 165 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PIH1D2Q8WWB5 315 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SCAMP4Q969E2 229 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ZDHHC12Q96GR4 267 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SRPK1Q96SB4 655 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ANP32EQ9BTT0 268 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MLPHQ9BV36 600 aaPredicted RBP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CARD9Q9H257 536 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 OSGEPL1Q9H4B0 414 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PDE7BQ9NP56 450 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TMEM9Q9P0T7 183 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CPNE7Q9UBL6 633 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 IP6K2Q9UHH9 426 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PLEKHM1Q9Y4G2 1056 aa12.15□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MGAQ8IWI9 3026 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PIPSLA2A3N6 862 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TTLL8A6PVC2 850 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SMTNL1A8MU46 457 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MATN3O15232 486 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GRID2O43424 1007 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LRCH4O75427 683 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 RFPL1O75677 317 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SLC25A14O95258 325 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ANKRD34CP0C6C1 535 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ACP5P13686 325 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MX2P20592 715 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CCNCP24863 283 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CSF2RBP32927 897 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 STAT5AP42229 794 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TNNT3P45378 269 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ARSDP51689 593 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ERV3-1Q14264 604 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZFYVE27Q5T4F4 411 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 IRF2BP2Q7Z5L9 587 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 BMPERQ8N8U9 685 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TEKT4Q8WW24 435 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TTC25Q96NG3 672 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CSPG4P5Q96PW8 444 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 HAUS4Q9H6D7 363 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 UCK1Q9HA47 277 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PCDH9Q9HC56 1237 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 RBM22Q9NW64 420 aaKnown RBP eCLIP12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 RCOR3Q9P2K3 495 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TBC1D29Q9UFV1 150 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KCNK6Q9Y257 313 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CHKBQ9Y259 395 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MAN2B2Q9Y2E5 1009 aa12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 BZW2Q9Y6E2 419 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB3-203ENST00000425319 C1orf232A0A0U1RR37 186 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LILRA5A6NI73 299 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MYO1FO00160 1098 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KMOO15229 486 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 UBXN7O94888 489 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 AGFG2O95081 481 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 NDUFA10O95299 355 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CLDN7O95471 211 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ATP1A1P05023 1023 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PDHA1P08559 390 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 RARAP10276 462 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 XRCC1P18887 633 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 IDSP22304 550 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CASP14P31944 242 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 HALP42357 657 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CLCNKAP51800 687 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 STC1P52823 247 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 RPS15P62841 145 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 STX1AQ16623 288 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 INSCQ1MX18 579 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms