RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CXCR5P32302 372 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 E2F1Q01094 437 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 INSM1Q01101 510 aaPredicted RBP22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 SNX1Q13596 522 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 SPARCL1Q14515 664 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 OASLQ15646 514 aaKnown RBP22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 PARP6Q2NL67 630 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 RANBP10Q6VN20 620 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 GALNT13Q8IUC8 556 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 FAM46DQ8NEK8 389 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 GPBAR1Q8TDU6 330 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 LRRC45Q96CN5 670 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 SCARF2Q96GP6 870 aaPredicted RBP22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 PDLIM2Q96JY6 352 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 PLEKHG4BQ96PX9 1271 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 ARFGAP3Q9NP61 516 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 TRNAU1APQ9NX07 287 aaKnown RBP22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 VPS18Q9P253 973 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 PADI4Q9UM07 663 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 ZNF148Q9UQR1 794 aa22.15■■□□□ 1.14
PTCHD3P2-201ENST00000424937 ZSCAN12O43309 604 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 METTL18O95568 372 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 FGGP02679 453 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 AK4P27144 223 aaPredicted RBP22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ADCY8P40145 1251 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 P3H1Q32P28 736 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PERM1Q5SV97 790 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PDPK2PQ6A1A2 396 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 SLC30A9Q6PML9 568 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 NRROSQ86YC3 692 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 MAPK15Q8TD08 544 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 NAT6Q93015 286 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 RTP4Q96DX8 246 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 TMEM121BQ9BXQ6 578 aaPredicted RBP22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 DPEP2Q9H4A9 486 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 IL17CQ9P0M4 197 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PKP3Q9Y446 797 aa22.14■■□□□ 1.13
PTCHD3P2-201ENST00000424937 FRYQ5TBA9 3013 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 CEP104O60308 925 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 OPA1O60313 960 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 SLC25A14O95258 325 aaPredicted RBP22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 IFNB1P01574 187 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 JUPP14923 745 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 SPAM1P38567 509 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 CTBSQ01459 385 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 SIX1Q15475 284 aaPredicted RBP22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PYCR3Q53H96 274 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PHYKPLQ8IUZ5 450 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 SFTPA2Q8IWL1 248 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 REXO1L1PQ8IX06 675 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 KLHDC8BQ8IXV7 354 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 GLYATL1Q969I3 302 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 TAAR2Q9P1P5 351 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PRKAB1Q9Y478 270 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PLEKHM1Q9Y4G2 1056 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ARL5AQ9Y689 179 aa22.13■■□□□ 1.13
PTCHD3P2-201ENST00000424937 STX7O15400 261 aaKnown RBP22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 DNAJC6O75061 913 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 STIP1P31948 543 aaKnown RBP22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ACTR1BP42025 376 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ACTR1AP61163 376 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ZNF648Q5T619 568 aaPredicted RBP22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ZDHHC20Q5W0Z9 365 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 FAM151BQ6UXP7 276 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 GPR156Q8NFN8 814 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 MAIP1Q8WWC4 291 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ABCG4Q9H172 646 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 LRRC40Q9H9A6 602 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 SPATS2LQ9NUQ6 558 aaKnown RBP22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 TRMT1Q9NXH9 659 aaKnown RBP22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ZNHIT2Q9UHR6 403 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PCYT1BQ9Y5K3 369 aaPredicted RBP22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ST14Q9Y5Y6 855 aa22.12■■□□□ 1.13
PTCHD3P2-201ENST00000424937 NOBOXO60393 691 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ACTN2P35609 894 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 TAF1AQ15573 450 aaPredicted RBP22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 LONRF2Q1L5Z9 754 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ATP13A5Q4VNC0 1218 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 KCTD11Q693B1 232 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 DENND5AQ6IQ26 1287 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PDCD7Q8N8D1 485 aaKnown RBP22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ZDHHC1Q8WTX9 485 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 CCDC74AQ96AQ1 378 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 CCDC3Q9BQI4 270 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 OR2AG1Q9H205 316 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 SYNDIG1Q9H7V2 258 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 RMI1Q9H9A7 625 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 IL26Q9NPH9 171 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 ATXN10Q9UBB4 475 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 CLCA2Q9UQC9 943 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 JRKLQ9Y4A0 524 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 UNC13CQ8NB66 2214 aa22.11■■□□□ 1.13
PTCHD3P2-201ENST00000424937 GLYATL1P3A0A0U1RQE8 302 aa22.1■■□□□ 1.13
PTCHD3P2-201ENST00000424937 C2orf81A6NN90 581 aa22.1■■□□□ 1.13
PTCHD3P2-201ENST00000424937 MTX2O75431 263 aa22.1■■□□□ 1.13
PTCHD3P2-201ENST00000424937 IGF2RP11717 2491 aa22.1■■□□□ 1.13
PTCHD3P2-201ENST00000424937 LPOP22079 712 aaPredicted RBP22.1■■□□□ 1.13
PTCHD3P2-201ENST00000424937 TARDBPQ13148 414 aaKnown RBP eCLIP22.1■■□□□ 1.13
PTCHD3P2-201ENST00000424937 LRP8Q14114 963 aa22.1■■□□□ 1.13
PTCHD3P2-201ENST00000424937 PTPRCAPQ14761 206 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms