RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PSMD9O00233 223 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PER2O15055 1255 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CLIC2O15247 247 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 MAPK13O15264 365 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CIDEAO60543 219 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SLC43A1O75387 559 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF821O75541 412 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PTBP3O95758 552 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 GCP02774 474 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CSF2P04141 144 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SERPING1P05155 500 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PCCBP05166 539 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 FAM58BPP0C7Q3 252 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 RALAP11233 206 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 KRT3P12035 628 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ANXA8P13928 327 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ADRA2CP18825 462 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CALB2P22676 271 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 NR2F2P24468 414 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PON1P27169 355 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 WNT5AP41221 380 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PTGER3P43115 390 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 NDUFV1P49821 464 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PEX5P50542 639 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CLCNKBP51801 687 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF135P52742 658 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 AP3M2P53677 418 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ADARP55265 1226 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ATP5IP56385 69 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CARD18P57730 90 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 TIRAPP58753 221 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 RBM6P78332 1123 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 TAP2Q03519 686 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 GIT2Q14161 759 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 LPIN1Q14693 890 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 RCN1Q15293 331 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CSRP2Q16527 193 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SGCBQ16585 318 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 UGP2Q16851 508 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PFKFB3Q16875 520 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 P3H1Q32P28 736 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PREPLQ4J6C6 727 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 IGSF11Q5DX21 431 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C6orf136Q5SQH8 315 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 RBM20Q5T481 1227 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ANXA8L1Q5VT79 327 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 FAM91A1Q658Y4 838 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SLC9A4Q6AI14 798 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 MSANTD2Q6P1R3 559 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ARSKQ6UWY0 536 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SERPINA13PQ6UXR4 307 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C11orf57Q6ZUT1 292 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 MED25Q71SY5 747 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CENPVQ7Z7K6 275 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 USP37Q86T82 979 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PHC2Q8IXK0 858 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C4orf19Q8IY42 314 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 GUF1Q8N442 669 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 LEMD2Q8NC56 503 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C11orf65Q8NCR3 313 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 NLGN4YQ8NFZ3 816 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 EXOC6Q8TAG9 804 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C9orf43Q8TAL5 461 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PTPMT1Q8WUK0 201 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 GLMPQ8WWB7 406 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SGCDQ92629 289 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 INPP5DQ92835 1189 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 MIB2Q96AX9 1013 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ARRDC3Q96B67 414 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 MOAP1Q96BY2 351 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 RNFT2Q96EX2 444 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 ARL5BQ96KC2 179 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PHACTR3Q96KR7 559 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 COQ10AQ96MF6 247 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SRSF8Q9BRL6 282 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SIKE1Q9BRV8 207 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C17orf80Q9BSJ5 609 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 MTG1Q9BT17 334 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 NDC1Q9BTX1 674 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 B3GNT4Q9C0J1 378 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 RAB17Q9H0T7 212 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C8orf33Q9H7E9 229 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 FARSBQ9NSD9 589 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 AGPAT5Q9NUQ2 364 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 DNAJC11Q9NVH1 559 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SMPD3Q9NY59 655 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 GPRC5DQ9NZD1 345 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SPG21Q9NZD8 308 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 NCKIPSDQ9NZQ3 722 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 JKAMPQ9P055 326 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 THEGQ9P2T0 379 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 TRIM10Q9UDY6 481 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 IL17BQ9UHF5 180 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 DDX25Q9UHL0 483 aaKnown RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 VPS51Q9UID3 782 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PRDM4Q9UKN5 801 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 SHOC2Q9UQ13 582 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PLEKHA6Q9Y2H5 1048 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 GMEB1Q9Y692 573 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 V9GYY5 206 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms