RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MYBPHLA2RUH7 354 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 MTSS1O43312 755 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 CBFA2T3O75081 653 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 CLTBP09497 229 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 LINC00032P0C843 101 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 KCNE1P15382 129 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 EEF1B2P24534 225 aaKnown RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 CASP2P42575 452 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 DIO3P55073 304 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ATP6V0D1P61421 351 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 POU4F1Q01851 419 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 INPP5AQ14642 412 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 CYP2A13Q16696 494 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 AGAP9Q5VTM2 703 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ABRAXAS1Q6UWZ7 409 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 BTLAQ7Z6A9 289 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 NECAB2Q7Z6G3 386 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ZNF280BQ86YH2 543 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 PCYOX1LQ8NBM8 494 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 BPIFB6Q8NFQ5 453 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 FAR2Q96K12 515 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 MYRFLQ96LU7 910 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 DOK1Q99704 481 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 FSD1LQ9BXM9 530 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 GLOD4Q9HC38 313 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 GDAP2Q9NXN4 497 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 PTBP2Q9UKA9 531 aaKnown RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 CRYL1Q9Y2S2 319 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 DERAQ9Y315 318 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 RAD54BQ9Y620 910 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 SZT2Q5T011 3432 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ANGPT2O15123 496 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 B3GAT3O94766 335 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 RASAL1O95294 804 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ITGB1P05556 798 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 CSF2RAP15509 400 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 NFATC3Q12968 1075 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ZNF678Q5SXM1 525 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 HECTD2Q5U5R9 776 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 GALNT18Q6P9A2 607 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 AFAP1L2Q8N4X5 818 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 DHRSXQ8N5I4 330 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ZUFSPQ96AP4 578 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 VPS50Q96JG6 964 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 VAT1Q99536 393 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 NEURL2Q9BR09 285 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 C9orf16Q9BUW7 83 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 TUBB1Q9H4B7 451 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 FANCEQ9HB96 536 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 RGS18Q9NS28 235 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 IFT80Q9P2H3 777 aaPredicted RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 ABCD2Q9UBJ2 740 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 PRG3Q9Y2Y8 225 aaPredicted RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 PDCD11Q14690 1871 aaKnown RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 C1orf232A0A0U1RR37 186 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ZNF701M0R085 212 aaPredicted RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 GFAPP14136 432 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 NR1D2Q14995 579 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 HACD2Q6Y1H2 254 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.28□□□□□ -0.128e-8■□□□□ 10.5
MSH5-206ENST00000423982 NCCRP1Q6ZVX7 275 aaPredicted RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 SPRED1Q7Z699 444 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ISCA2Q86U28 154 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 SNX29P2Q8IUI4 249 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 ARHGAP12Q8IWW6 846 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 LRRC58Q96CX6 371 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 MRGPRX2Q96LB1 330 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 MID1IP1Q9NPA3 183 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 GIT1Q9Y2X7 761 aa14.28□□□□□ -0.12
MSH5-206ENST00000423982 AAR2Q9Y312 384 aaKnown RBP14.28□□□□□ -0.12
MSH5-206ENST00000423982 TRIM43BA6NCK2 446 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 ENPP3O14638 875 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 ZNF189O75820 626 aaPredicted RBP14.27□□□□□ -0.12
MSH5-206ENST00000423982 CDK14O94921 469 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 IMPDH1P20839 514 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 MAP4P27816 1152 aaKnown RBP14.27□□□□□ -0.12
MSH5-206ENST00000423982 CAPGP40121 348 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 HCAR3P49019 387 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 BCAP31P51572 246 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 MAXP61244 160 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 GSTM4Q03013 218 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 PIGFQ07326 219 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 ITGADQ13349 1161 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 POLD3Q15054 466 aaPredicted RBP14.27□□□□□ -0.12
MSH5-206ENST00000423982 PLA2G4EQ3MJ16 856 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 TMEM214Q6NUQ4 689 aaKnown RBP14.27□□□□□ -0.12
MSH5-206ENST00000423982 GLB1LQ6UWU2 654 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 TAC4Q86UU9 113 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 ATPAF2Q8N5M1 289 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 PACRGLQ8N7B6 248 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 TRPV3Q8NET8 790 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 NUDT8Q8WV74 236 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 KCTD13Q8WZ19 329 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 TRIM43Q96BQ3 446 aaPredicted RBP14.27□□□□□ -0.12
MSH5-206ENST00000423982 ROPN1LQ96C74 230 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms