RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 NLE1Q9NVX2 485 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-205ENST00000423941 SPASTQ9UBP0 616 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 OAS3Q9Y6K5 1087 aaKnown RBP18.32■□□□□ 0.52
HDAC6-205ENST00000423941 TCRBV7S3A2A0A539 114 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 NEMP2A6NFY4 417 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 LMO7DNF2Z398 122 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 DNAJC6O75061 913 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 ECEL1O95672 775 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 GAS8O95995 478 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 SLC4A1P02730 911 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 TUBB4AP04350 444 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 IVDP26440 423 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 POLD2P49005 469 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 BASP1P80723 227 aaKnown RBP18.31■□□□□ 0.52
HDAC6-205ENST00000423941 CHRNA6Q15825 494 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 INAVAQ3KP66 663 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 CERCAMQ5T4B2 595 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 ALS2CLQ60I27 953 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 LVRNQ6Q4G3 990 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 ZNF534Q76KX8 674 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 ZNF572Q7Z3I7 529 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-205ENST00000423941 FSTL5Q8N475 847 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-205ENST00000423941 DEFB124Q8NES8 71 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 OR13C4Q8NGS5 318 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 STYXQ8WUJ0 223 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 CPT1BQ92523 772 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 RUNDC3BQ96NL0 473 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 CDC6Q99741 560 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 SLC32A1Q9H598 525 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 TRIM39Q9HCM9 518 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 SMOXQ9NWM0 555 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 TRNAU1APQ9NX07 287 aaKnown RBP18.31■□□□□ 0.52
HDAC6-205ENST00000423941 NLGN3Q9NZ94 848 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 APPL1Q9UKG1 709 aa18.31■□□□□ 0.52
HDAC6-205ENST00000423941 ZFC3H1O60293 1989 aaKnown RBP18.3■□□□□ 0.52
HDAC6-205ENST00000423941 GLYATL1P3A0A0U1RQE8 302 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 AP3B1O00203 1094 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 TRIM38O00635 465 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 INPP4BO15327 924 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 CA5AP35218 305 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 HADHAP40939 763 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 ACVR1Q04771 509 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 PEX6Q13608 980 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 POU6F1Q14863 301 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 PYCR3Q53H96 274 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 PRRT3Q5FWE3 981 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 LRRC8BQ6P9F7 803 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 PPP1R21Q6ZMI0 780 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 SYDE1Q6ZW31 735 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-205ENST00000423941 TRIM74Q86UV6 250 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 DNAAF3Q8N9W5 541 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 FAM181AQ8N9Y4 354 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 MCUQ8NE86 351 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 GPBAR1Q8TDU6 330 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 SETD7Q8WTS6 366 aaKnown RBP18.3■□□□□ 0.52
HDAC6-205ENST00000423941 PEX13Q92968 403 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 C16orf45Q96MC5 204 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-205ENST00000423941 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 CYP4F12Q9HCS2 524 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 PIH1D1Q9NWS0 290 aaKnown RBP18.3■□□□□ 0.52
HDAC6-205ENST00000423941 SUFUQ9UMX1 484 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 TMEM98Q9Y2Y6 226 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 ST14Q9Y5Y6 855 aa18.3■□□□□ 0.52
HDAC6-205ENST00000423941 CNOT1A5YKK6 2376 aaKnown RBP18.3■□□□□ 0.52
HDAC6-205ENST00000423941 GPR89AB7ZAQ6 455 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 GIPC1O14908 333 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 CHUKO15111 745 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 YY2O15391 372 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 DKK1O94907 266 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 SLC25A14O95258 325 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-205ENST00000423941 GPR89BP0CG08 455 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ADRA1DP25100 572 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 NPY2RP49146 381 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 LMAN1P49257 510 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 LAMB3Q13751 1172 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 PTK6Q13882 451 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ELOCQ15369 112 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 TRIP6Q15654 476 aaKnown RBP18.29■□□□□ 0.52
HDAC6-205ENST00000423941 PROX2Q3B8N5 592 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 KHDC1Q4VXA5 237 aaKnown RBP18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ANKRD22Q5VYY1 191 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ARMC3Q5W041 872 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 RD3Q7Z3Z2 195 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ADGRG6Q86SQ4 1221 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 EID2Q8N6I1 236 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 NAT8LQ8N9F0 302 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 SPATA4Q8NEY3 305 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ZNF398Q8TD17 642 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 LMX1AQ8TE12 382 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-205ENST00000423941 CDKN2AIPNLQ96HQ2 116 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 DUSP23Q9BVJ7 150 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 TMEM168Q9H0V1 697 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 TOR4AQ9NXH8 423 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ATXN10Q9UBB4 475 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 FKBPLQ9UIM3 349 aa18.29■□□□□ 0.52
HDAC6-205ENST00000423941 ARHGEF17Q96PE2 2063 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-205ENST00000423941 TRBV5-4A0A0C4DH59 114 aa18.28■□□□□ 0.52
HDAC6-205ENST00000423941 HEATR9A2RTY3 570 aa18.28■□□□□ 0.52
HDAC6-205ENST00000423941 SIGLEC6O43699 453 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms