RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CCDC175P0C221 793 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 BPIP17213 487 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 AK4P27144 223 aaPredicted RBP20.16■□□□□ 0.82
GTF3A-202ENST00000419181 HMGCLP35914 325 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 TNNT3P45378 269 aaPredicted RBP20.16■□□□□ 0.82
GTF3A-202ENST00000419181 GEMP55040 296 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 CCZ1BP86790 482 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 CCZ1P86791 482 aaPredicted RBP20.16■□□□□ 0.82
GTF3A-202ENST00000419181 CTBSQ01459 385 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 ALS2CLQ60I27 953 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 SLC25A41Q8N5S1 370 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 OR6C4Q8NGE1 309 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 CCDC74AQ96AQ1 378 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 NXPE2Q96DL1 559 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 DEPDC7Q96QD5 511 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 ZSCAN5AQ9BUG6 496 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 SPATA16Q9BXB7 569 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 NRSN2Q9GZP1 204 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 SPATS2LQ9NUQ6 558 aaKnown RBP20.16■□□□□ 0.82
GTF3A-202ENST00000419181 HACD3Q9P035 362 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 TAAR2Q9P1P5 351 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 RABGEF1Q9UJ41 708 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 TCRBV7S2A1N4TA0A589 114 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 CASC3O15234 703 aaKnown RBP20.15■□□□□ 0.82
GTF3A-202ENST00000419181 DNAJC6O75061 913 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 ASMTLO95671 621 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 FGF1P05230 155 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 PSMB4P28070 264 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 CYP4F3Q08477 520 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 RTP5Q14D33 572 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 C14orf28Q4W4Y0 310 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 ZNF569Q5MCW4 686 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 CERCAMQ5T4B2 595 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 PDPK2PQ6A1A2 396 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 MARK2Q7KZI7 788 aaKnown RBP20.15■□□□□ 0.82
GTF3A-202ENST00000419181 TTC30BQ8N4P2 665 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 TRAM1L1Q8N609 369 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 WDR48Q8TAF3 677 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 CCDC110Q8TBZ0 833 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 PLEKHG4BQ96PX9 1271 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 R3HDM2Q9Y2K5 976 aaKnown RBP20.15■□□□□ 0.82
GTF3A-202ENST00000419181 GPSM3Q9Y4H4 160 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 PCDHB1Q9Y5F3 818 aa20.15■□□□□ 0.82
GTF3A-202ENST00000419181 CSO75390 466 aaKnown RBP20.14■□□□□ 0.81
GTF3A-202ENST00000419181 TCEA3O75764 348 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 AGTP01019 485 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 GLB1P16278 677 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 ADRA1AP35348 466 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 LRP8Q14114 963 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 HLTFQ14527 1009 aaKnown RBP eCLIP20.14■□□□□ 0.81
GTF3A-202ENST00000419181 SLC30A9Q6PML9 568 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 C17orf82Q86X59 251 aaPredicted RBP20.14■□□□□ 0.81
GTF3A-202ENST00000419181 GALNT13Q8IUC8 556 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 SLC35B2Q8TB61 432 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 FICDQ9BVA6 458 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 LZTFL1Q9NQ48 299 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 AAR2Q9Y312 384 aaKnown RBP20.14■□□□□ 0.81
GTF3A-202ENST00000419181 PLEKHM1Q9Y4G2 1056 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 PCYT1BQ9Y5K3 369 aaPredicted RBP20.14■□□□□ 0.81
GTF3A-202ENST00000419181 CELSR3Q9NYQ7 3312 aa20.14■□□□□ 0.81
GTF3A-202ENST00000419181 C5orf60A6NFR6 353 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 NTN3O00634 580 aaPredicted RBP20.13■□□□□ 0.81
GTF3A-202ENST00000419181 ACTR1BP42025 376 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 ACTR1AP61163 376 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 ISXQ2M1V0 245 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 MEI1Q5TIA1 1274 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 RANBP10Q6VN20 620 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 RBM44Q6ZP01 1051 aaKnown RBP20.13■□□□□ 0.81
GTF3A-202ENST00000419181 KLHDC8BQ8IXV7 354 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 BLOC1S5Q8TDH9 187 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 ZDHHC1Q8WTX9 485 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 PPP1R2P1Q96PQ5 205 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 RMI1Q9H9A7 625 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 GRPEL1Q9HAV7 217 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 BPIFA1Q9NP55 256 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 IL17CQ9P0M4 197 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 APPL1Q9UKG1 709 aa20.13■□□□□ 0.81
GTF3A-202ENST00000419181 NUDT21O43809 227 aaKnown RBP20.12■□□□□ 0.81
GTF3A-202ENST00000419181 SLC25A14O95258 325 aaPredicted RBP20.12■□□□□ 0.81
GTF3A-202ENST00000419181 PNLIPP16233 465 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 PEX6Q13608 980 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 PRPSAP1Q14558 356 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 SEL1L2Q5TEA6 688 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 GLT6D1Q7Z4J2 308 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 FAM71DQ8N9W8 422 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 DTX3LQ8TDB6 740 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 GLYATL1Q969I3 302 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 CARD9Q9H257 536 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 LRIT1Q9P2V4 623 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 ATXN10Q9UBB4 475 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 ZNHIT2Q9UHR6 403 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 PRKAB1Q9Y478 270 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 RNF215Q9Y6U7 377 aa20.12■□□□□ 0.81
GTF3A-202ENST00000419181 ZNF106Q9H2Y7 1883 aaKnown RBP20.11■□□□□ 0.81
GTF3A-202ENST00000419181 UNC13CQ8NB66 2214 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 NRDCO43847 1150 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 NUAK1O60285 661 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 PDX1P52945 283 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 GDF10P55107 478 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 MAZP56270 477 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms