RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TOP1P11387 765 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 NAGAP17050 411 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 MYF6P23409 242 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 CMA1P23946 247 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 EPHA8P29322 1005 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 OAS2P29728 719 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 HOXD3P31249 432 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 CBSP35520 551 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ACTN2P35609 894 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 CPOXP36551 454 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 USP8P40818 1118 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 GABRB2P47870 512 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 RFX5P48382 616 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 AMPHP49418 695 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 HARS2P49590 506 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 CXCR3P49682 368 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 EFNA5P52803 228 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 EIF3BP55884 814 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 EVCP57679 992 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 CLDN2P57739 230 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 IRX3P78415 501 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 MYL5Q02045 173 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ITGADQ13349 1161 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 MYBPC2Q14324 1141 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 HNF4GQ14541 408 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 SMC1AQ14683 1233 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 ARHGEF6Q15052 776 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 PPP2R5BQ15173 497 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 STK38Q15208 465 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 RNPS1Q15287 305 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 MCMDC2Q4G0Z9 681 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ESCO2Q56NI9 601 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 LRRC8EQ6NSJ5 796 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ARMCX5Q6P1M9 558 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 OLFM4Q6UX06 510 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 KRBA2Q6ZNG9 492 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 C9orf47Q6ZRZ4 202 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 SLC46A3Q7Z3Q1 461 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 RPAINQ86UA6 219 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 AACSQ86V21 672 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 VSTM4Q8IW00 320 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 SFTPA2Q8IWL1 248 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 PELI3Q8N2H9 469 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 NECAB1Q8N987 351 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 CTCFLQ8NI51 663 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 OIT3Q8WWZ8 545 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ZBTB9Q96C00 473 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 NR1H4Q96RI1 486 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 MXRA8Q9BRK3 442 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 H2AFJQ9BTM1 129 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 MSTO1Q9BUK6 570 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 DCLK3Q9C098 648 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 MED4Q9NPJ6 270 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 SMYD2Q9NRG4 433 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 TRMT1Q9NXH9 659 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 PLK2Q9NYY3 685 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 TUBE1Q9UJT0 475 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 A4GNTQ9UNA3 340 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 FAM96BQ9Y3D0 163 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 USP16Q9Y5T5 823 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ABCC12Q96J65 1359 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 TMEM2Q9UHN6 1383 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 AFDNP55196 1824 aaKnown RBP2.72□□□□□ -1.97
VPS41-206ENST00000418457 SRCAPQ6ZRS2 3230 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 KDM3AQ9Y4C1 1321 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 STRCP1A6NGW2 1772 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 A0A0D9SFI3 127 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 A0A0U1RQF3 1178 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 FAM237AA0A1B0GTK4 181 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 A0A1W2PQM1 296 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 PI4KAP2A4QPH2 592 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 LRRC53A6NM62 1247 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 B4E171 279 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 MAP2K7O14733 419 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 BCAT2O15382 392 aaPredicted RBP2.72□□□□□ -1.97
VPS41-206ENST00000418457 SOX30O94993 753 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 TBX18O95935 607 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 MT-CYBP00156 380 aaPredicted RBP2.72□□□□□ -1.97
VPS41-206ENST00000418457 CD4P01730 458 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 TFP02787 698 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 C4AP0C0L4 1744 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 C4BP0C0L5 1744 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 CCDC175P0C221 793 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 UBL4AP11441 157 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 CAPN2P17655 700 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 TNFAIP3P21580 790 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 HOXC9P31274 260 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 ARRB2P32121 409 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 MLH1P40692 756 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 TSPAN7P41732 249 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 MAGEA9P43362 315 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 GNAQP50148 359 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 CCR9P51686 369 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 NUDT6P53370 316 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 UBASH3AP57075 661 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 LINC00205P59089 165 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 ADORA2A-AS1P86434 159 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 SETQ01105 290 aaPredicted RBP2.72□□□□□ -1.97
VPS41-206ENST00000418457 TEFQ10587 303 aa2.72□□□□□ -1.97
VPS41-206ENST00000418457 GRIK3Q13003 919 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms