RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 NLGN3Q9NZ94 848 aa13.17□□□□□ -0.3
TGFBR3-203ENST00000417833 WASF3Q9UPY6 502 aa13.17□□□□□ -0.3
TGFBR3-203ENST00000417833 SPO11Q9Y5K1 396 aa13.17□□□□□ -0.3
TGFBR3-203ENST00000417833 LOC400499M0QZD8 3231 aa13.17□□□□□ -0.3
TGFBR3-203ENST00000417833 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 GOLGA6CA6NDK9 693 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 GOLGA6BA6NDN3 693 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 GOLGA8CPA6NN73 597 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 TAF4O00268 1085 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 AQP9O43315 295 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 RAD51CO43502 376 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 SDC3O75056 442 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 TRIM16O95361 564 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 METTL18O95568 372 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 LDOC1O95751 146 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 AGTP01019 485 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 TNFP01375 233 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 GOLGA6DP0CG33 693 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 ALPPL2P10696 532 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 COILP38432 576 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 CHRNA4P43681 627 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 GPR1P46091 355 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 SIM1P81133 766 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 ZDHHC20Q5W0Z9 365 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 PDPK2PQ6A1A2 396 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 RAET1GQ6H3X3 334 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 LVRNQ6Q4G3 990 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 HEATR4Q86WZ0 1026 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 FSTL5Q8N475 847 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 FAM181AQ8N9Y4 354 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 ZNF548Q8NEK5 533 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 C1orf54Q8WWF1 131 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.16□□□□□ -0.34e-7■■■■■ 58.1
TGFBR3-203ENST00000417833 SCARF2Q96GP6 870 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 COX14Q96I36 57 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 RIOK2Q9BVS4 552 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 GOLGA6AQ9NYA3 693 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 FTSJ1Q9UET6 329 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 APOBEC3BQ9UH17 382 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 CD84Q9UIB8 345 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 ZNF148Q9UQR1 794 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 UTP11Q9Y3A2 253 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 ITPR1Q14643 2758 aa13.16□□□□□ -0.3
TGFBR3-203ENST00000417833 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 ERI2A8K979 691 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 LMO7DNF2Z398 122 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 TRIM38O00635 465 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 AURKAO14965 403 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 PPFIA2O75334 1257 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 CEACAM5P06731 702 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 PIRTP0C851 137 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 CDK4P11802 303 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 DR1Q01658 176 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 CUL1Q13616 776 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 ELOCQ15369 112 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 DENND5AQ6IQ26 1287 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 FBXO38Q6PIJ6 1188 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 CCDC137Q6PK04 289 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 C4orf22Q6V702 233 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 RBFAQ8N0V3 343 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 SLC25A41Q8N5S1 370 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 GPR26Q8NDV2 337 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 OR1E3Q8WZA6 343 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 SLCO2A1Q92959 643 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 TSACCQ96A04 125 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 CNDP2Q96KP4 475 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 PLEKHG4BQ96PX9 1271 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 AGAP2Q99490 1192 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 LRRC61Q9BV99 259 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 FICDQ9BVA6 458 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 CLPBQ9H078 707 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 TCEAL2Q9H3H9 227 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 FGF22Q9HCT0 170 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 ARFGAP3Q9NP61 516 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 TOR4AQ9NXH8 423 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 IL17CQ9P0M4 197 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 CNOT6Q9ULM6 557 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 SHOC2Q9UQ13 582 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 SLC17A4Q9Y2C5 497 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 TDRD6O60522 2096 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 LAMA5O15230 3695 aa13.15□□□□□ -0.3
TGFBR3-203ENST00000417833 SCN8AQ9UQD0 1980 aa13.14□□□□□ -0.31
TGFBR3-203ENST00000417833 PRSS38A1L453 326 aa13.14□□□□□ -0.31
TGFBR3-203ENST00000417833 F5H423 210 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-203ENST00000417833 SIGLEC6O43699 453 aa13.14□□□□□ -0.31
TGFBR3-203ENST00000417833 GAS8O95995 478 aa13.14□□□□□ -0.31
TGFBR3-203ENST00000417833 IVLP07476 585 aa13.14□□□□□ -0.31
TGFBR3-203ENST00000417833 FTH1P19P0C7X4 201 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms