RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ELF1P32519 619 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 HNF1BP35680 557 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 ATP6V1E1P36543 226 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 THPOP40225 353 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 DCAF7P61962 342 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 COX10Q12887 443 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 STX1AQ16623 288 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 AP5B1Q2VPB7 878 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZNF284Q2VY69 593 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 SETMARQ53H47 684 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 DCAF6Q58WW2 860 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 ATG9BQ674R7 924 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM47EQ6ZV65 393 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 RUFY3Q7L099 469 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 SDCCAG8Q86SQ7 713 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 NLRP14Q86W24 1093 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 ANKRD18AQ8IVF6 992 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 HERC6Q8IVU3 1022 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 CCAR2Q8N163 923 aaKnown RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 USP38Q8NB14 1042 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 PCYOX1LQ8NBM8 494 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 MCPH1Q8NEM0 835 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 OR14A16Q8NHC5 309 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 GOLGA5Q8TBA6 731 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM216AQ8WUB2 273 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 EXOC4Q96A65 974 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 TMEM18Q96B42 140 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 RBM17Q96I25 401 aaKnown RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 COG3Q96JB2 828 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 MPHOSPH8Q99549 860 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 CDK19Q9BWU1 502 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 CTDSP1Q9GZU7 261 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 LSG1Q9H089 658 aaKnown RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM107BQ9H098 131 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 SUDS3Q9H7L9 328 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 TRPV4Q9HBA0 871 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 UBN1Q9NPG3 1134 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 FANCFQ9NPI8 374 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 UTP6Q9NYH9 597 aaKnown RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 FBXL5Q9UKA1 691 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 PROCRQ9UNN8 238 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 CNPY2Q9Y2B0 182 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 A2ML1A8K2U0 1454 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 NEO1Q92859 1461 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 TECPR2O15040 1411 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 TSPOAP1O95153 1857 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 A0A0B4J203 849 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 IGHV4-28A0A0C4DH34 117 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 STX16-NPEPL1H3BU86 382 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 MPHOSPH10O00566 681 aaKnown RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 STX16O14662 325 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 AP5Z1O43299 807 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ITM2AO43736 263 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 HBP1O60381 514 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 CBX6O95503 412 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 APBB3O95704 486 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 HSPA4LO95757 839 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 MT-ND3P03897 115 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 POLBP06746 335 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 SFTPCP11686 197 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 FCGR1AP12314 374 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 KRT10P13645 584 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 DESP17661 470 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 CENPAP49450 140 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ART1P52961 327 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 LIMK1P53667 647 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 CSE1LP55060 971 aaKnown RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ST3GAL1Q11201 340 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 SCARB2Q14108 478 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 NECTIN1Q15223 517 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 SH2D4BQ5SQS7 431 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 NAA16Q6N069 864 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 FIP1L1Q6UN15 594 aaKnown RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 DLK2Q6UY11 383 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 BTN2A1Q7KYR7 527 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 HEATR4Q86WZ0 1026 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 IQCA1Q86XH1 822 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 VSIG1Q86XK7 387 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 EPHX4Q8IUS5 362 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 FBXL16Q8N461 479 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ESX1Q8N693 406 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ANKRD52Q8NB46 1076 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 CCDC191Q8NCU4 936 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 LMO3Q8TAP4 145 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 NEK9Q8TD19 979 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZNF606Q8WXB4 792 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 USP13Q92995 863 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 RILPL2Q969X0 211 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 RNFT2Q96EX2 444 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 C16orf45Q96MC5 204 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 AGAP3Q96P47 875 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ADPGKQ9BRR6 497 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 SLC25A33Q9BSK2 321 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 PI4K2AQ9BTU6 479 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 C6orf106Q9H6K1 298 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 TLR8Q9NR97 1041 aaKnown RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 RBM28Q9NW13 759 aaKnown RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 HDAC6Q9UBN7 1215 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms