RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PNMA8BQ9ULN7 279 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-204ENST00000414781 SNX10Q9Y5X0 201 aa13.54□□□□□ -0.24
RAPGEF1-204ENST00000414781 MRFAP1Q9Y605 127 aa13.54□□□□□ -0.24
RAPGEF1-204ENST00000414781 ESPL1Q14674 2120 aa13.54□□□□□ -0.24
RAPGEF1-204ENST00000414781 FBN3Q75N90 2809 aa13.54□□□□□ -0.24
RAPGEF1-204ENST00000414781 CCDC188H7C350 402 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 ZW10O43264 779 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 HNRNPRO43390 633 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 NUDT21O43809 227 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 RASGRP1O95267 797 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 LDLRP01130 860 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 FGF3P11487 239 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 TCN2P20062 427 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 NR1D1P20393 614 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 OR1E1P30953 314 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 NDST2P52849 883 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 RAB15P59190 212 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 TUBB4BP68371 445 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 KLF1Q13351 362 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 TRA2AQ13595 282 aaKnown RBP eCLIP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 CCNG2Q16589 344 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 ZNF783Q6ZMS7 281 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 NLGN4XQ8N0W4 816 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 UMODL1-AS1Q8N2C9 162 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 PQLC3Q8N755 202 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 PLD5Q8N7P1 536 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 AGBL5Q8NDL9 886 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 NLGN4YQ8NFZ3 816 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 STARD8Q92502 1023 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 HAUS1Q96CS2 278 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 TEFMQ96QE5 360 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 C2orf49Q9BVC5 232 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 MAP4K5Q9Y4K4 846 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 OR51B4Q9Y5P0 310 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 B3GALT1Q9Y5Z6 326 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 KCNMB2Q9Y691 235 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 ADGRG4Q8IZF6 3080 aa13.53□□□□□ -0.24
RAPGEF1-204ENST00000414781 TRPM6Q9BX84 2022 aa13.52□□□□□ -0.24
RAPGEF1-204ENST00000414781 PCNX1Q96RV3 2341 aa13.52□□□□□ -0.24
RAPGEF1-204ENST00000414781 HIVEP3Q5T1R4 2406 aa13.52□□□□□ -0.24
RAPGEF1-204ENST00000414781 NEMP1O14524 444 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 LEFTY1O75610 366 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 RFPL1O75677 317 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 GGCXP38435 758 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 DYNLT1P63172 113 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 XRCC4Q13426 336 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 PDK1Q15118 436 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 LLGL1Q15334 1064 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 PARP15Q460N3 678 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 DCAF12Q5T6F0 453 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 AADACL2Q6P093 401 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 NLRP14Q86W24 1093 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 CIR1Q86X95 450 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 HID1Q8IV36 788 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 CHST14Q8NCH0 376 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 ATL2Q8NHH9 583 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 CENPTQ96BT3 561 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 L2HGDHQ9H9P8 463 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 MPP6Q9NZW5 540 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 TBC1D30Q9Y2I9 924 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 HEY1Q9Y5J3 304 aa13.52□□□□□ -0.25
RAPGEF1-204ENST00000414781 PDZD2O15018 2839 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 APCP25054 2843 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 HIVEP1P15822 2718 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 ILVBLA1L0T0 632 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 ARHGAP42A6NI28 874 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 HACD1B0YJ81 288 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 B4E171 279 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 K7EM74 188 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 PPP1R12AO14974 1030 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 RAMP2O60895 175 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 CTAGE8P0CG41 777 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 VARSP26640 1264 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 HTR1BP28222 390 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 IGFALSP35858 605 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 TSPAN7P41732 249 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 ABHD18Q0P651 414 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 POLD3Q15054 466 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 C14orf28Q4W4Y0 310 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 ALFQ53S48 1182 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 NCBP2-AS2Q69YL0 99 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 C22orf39Q6P5X5 142 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 DRICH1Q6PGQ1 229 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 OGFOD3Q6PK18 319 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 ZNF572Q7Z3I7 529 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 TFAP2DQ7Z6R9 452 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 CTAGE4Q8IX94 777 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 SPATA4Q8NEY3 305 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 ART4Q93070 314 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 MUC3BQ9H195 1237 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 MAGEH1Q9H213 219 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 TRIT1Q9H3H1 467 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 SLC39A1Q9NY26 324 aa13.51□□□□□ -0.25
RAPGEF1-204ENST00000414781 LRIT1Q9P2V4 623 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms