RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SLC30A9Q6PML9 568 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 PROSER1Q86XN7 944 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 TTC13Q8NBP0 860 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 SPATA13Q96N96 652 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 DEPDC7Q96QD5 511 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 OR2M4Q96R27 311 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 FICDQ9BVA6 458 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 FSD1LQ9BXM9 530 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 CDH19Q9H159 772 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 SYNDIG1Q9H7V2 258 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 ARFGAP3Q9NP61 516 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 LZTFL1Q9NQ48 299 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 RAD18Q9NS91 495 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 TAAR2Q9P1P5 351 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 ZNHIT2Q9UHR6 403 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 R3HDM2Q9Y2K5 976 aaKnown RBP14.7□□□□□ -0.06
LIMS4-201ENST00000413601 PRKAB1Q9Y478 270 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 PCDHB1Q9Y5F3 818 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 PCYT1BQ9Y5K3 369 aaPredicted RBP14.7□□□□□ -0.06
LIMS4-201ENST00000413601 AK5Q9Y6K8 562 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 ASPMQ8IZT6 3477 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 USP24Q9UPU5 2620 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 IGF2RP11717 2491 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 KMT2BQ9UMN6 2715 aaPredicted RBP14.69□□□□□ -0.06
LIMS4-201ENST00000413601 SRRM3A6NNA2 597 aaPredicted RBP14.69□□□□□ -0.06
LIMS4-201ENST00000413601 DNAJC6O75061 913 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 FGF1P05230 155 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 HLA-DPA1P20036 260 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 C14orf28Q4W4Y0 310 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 ZNF648Q5T619 568 aaPredicted RBP14.69□□□□□ -0.06
LIMS4-201ENST00000413601 GALNT13Q8IUC8 556 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 TTC30BQ8N4P2 665 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 TRAM1L1Q8N609 369 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 BLOC1S5Q8TDH9 187 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 ZDHHC1Q8WTX9 485 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 NXPE2Q96DL1 559 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 APOL2Q9BQE5 337 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 ZSCAN5AQ9BUG6 496 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 NRSN2Q9GZP1 204 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 TRABDQ9H4I3 376 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 VPS18Q9P253 973 aa14.69□□□□□ -0.06
LIMS4-201ENST00000413601 NFKBIL1Q9UBC1 381 aaPredicted RBP14.69□□□□□ -0.06
LIMS4-201ENST00000413601 BUD23O43709 281 aaKnown RBP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 KRT37O76014 449 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 SLC25A14O95258 325 aaPredicted RBP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 GLB1P16278 677 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 HMGCLP35914 325 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 ACTR1BP42025 376 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 MAZP56270 477 aaKnown RBP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 ACTR1AP61163 376 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 CCL7P80098 99 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 OLIG2Q13516 323 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 HLTFQ14527 1009 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 PRPSAP1Q14558 356 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 RTP5Q14D33 572 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 ISXQ2M1V0 245 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 ZNF569Q5MCW4 686 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 CERCAMQ5T4B2 595 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 MEI1Q5TIA1 1274 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 RBM44Q6ZP01 1051 aaKnown RBP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 CHST15Q7LFX5 561 aaPredicted RBP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 GLT6D1Q7Z4J2 308 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 Q8N9G6 341 aaPredicted RBP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 FAM71DQ8N9W8 422 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 OR6C4Q8NGE1 309 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 SLC35B2Q8TB61 432 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 PATE1Q8WXA2 126 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 GRPEL1Q9HAV7 217 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 HACD3Q9P035 362 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 LRIT1Q9P2V4 623 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 ATXN10Q9UBB4 475 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 DKK4Q9UBT3 224 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 AAR2Q9Y312 384 aaKnown RBP14.68□□□□□ -0.06
LIMS4-201ENST00000413601 RNF215Q9Y6U7 377 aa14.68□□□□□ -0.06
LIMS4-201ENST00000413601 C5orf60A6NFR6 353 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 NTN3O00634 580 aaPredicted RBP14.67□□□□□ -0.06
LIMS4-201ENST00000413601 USP12O75317 370 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 TCEA3O75764 348 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 ECEL1O95672 775 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 RPLP0P05388 317 aaKnown RBP14.67□□□□□ -0.06
LIMS4-201ENST00000413601 ADRA1AP35348 466 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 SPIDRQ14159 915 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 SPARCL1Q14515 664 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 RPS6KA1Q15418 735 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 SEL1L2Q5TEA6 688 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 RANBP10Q6VN20 620 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 ZNF662Q6ZS27 426 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 NAGSQ8N159 534 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 ATG4AQ8WYN0 398 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 GLYATL1Q969I3 302 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 PLEKHG4BQ96PX9 1271 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 TMEM121Q9BTD3 319 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 OR2AG1Q9H205 316 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 TRIM39Q9HCM9 518 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 IL17CQ9P0M4 197 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 APPL1Q9UKG1 709 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 TMPRSS11EQ9UL52 423 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 ENTPD2Q9Y5L3 495 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 EPG5Q9HCE0 2579 aa14.67□□□□□ -0.06
LIMS4-201ENST00000413601 A0A1W2PQM1 296 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms