RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 B4DGG1 531 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 TIMM23O14925 209 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 HSPA12AO43301 675 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 PLPP2O43688 288 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 EPN2O95208 641 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 VNN2O95498 520 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 GH2P01242 217 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 CCDC175P0C221 793 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 ARSBP15848 533 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 KELP23276 732 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 DNASE1P24855 282 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 CTNNA1P35221 906 aaKnown RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 RPL3P39023 403 aaKnown RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 ARSEP51690 589 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 ADORA2A-AS1P86434 159 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 SRSF4Q08170 494 aaKnown RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 TRAF1Q13077 416 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 SCARB2Q14108 478 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 CTTNQ14247 550 aaKnown RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 PTGR1Q14914 329 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 RBMS2Q15434 407 aaKnown RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 SRSF7Q16629 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 CRY2Q49AN0 593 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 DUS1LQ6P1R4 473 aaKnown RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 SLC36A4Q6YBV0 504 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 LDB1Q86U70 411 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 THNSL1Q8IYQ7 743 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 FBXO39Q8N4B4 442 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 C7orf57Q8NEG2 295 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 APBB2Q92870 758 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 GBP5Q96PP8 586 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 KXD1Q9BQD3 176 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 HAUS8Q9BT25 410 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 FAM129AQ9BZQ8 928 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 SPATC1LQ9H0A9 340 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 FAM234AQ9H0X4 552 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 RSPH9Q9H1X1 276 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 MMP27Q9H306 513 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 ST6GALNAC4Q9H4F1 302 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 DENND2DQ9H6A0 471 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 SEBOXQ9HB31 216 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 CHMP1AQ9HD42 196 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 KRCC1Q9NPI7 259 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 HAO2Q9NYQ3 351 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 SELENONQ9NZV5 590 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 CRNNQ9UBG3 495 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 HS3ST3B1Q9Y662 390 aa4.78□□□□□ -1.64
HMGB3P31-201ENST00000413333 MAGEB17A8MXT2 336 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 MAP2K7O14733 419 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SLCO2B1O94956 709 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SYF2O95926 243 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SLPIP03973 132 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 HSP90AB1P08238 724 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 PRLRP16471 622 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 NAGAP17050 411 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 DDX5P17844 614 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 GNLYP22749 145 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 HNRNPH1P31943 449 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 TNNT3P45378 269 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 MMP13P45452 471 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 RASSF2P50749 326 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZP1P60852 638 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 CSNK2A1P68400 391 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 PPATQ06203 517 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SPOCK1Q08629 439 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 TFCP2Q12800 502 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 RALGDSQ12967 914 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 MAD2L1Q13257 205 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 FAM98BQ52LJ0 330 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 DCST1Q5T197 706 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 DAB2IPQ5VWQ8 1189 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 CST9LP1Q5W188 147 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 NSUN5P2Q63ZY6 315 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 DHRS7BQ6IAN0 325 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 TMEM211Q6ICI0 200 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 TYW3Q6IPR3 259 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 HAUS6Q7Z4H7 955 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 IQCHQ86VS3 1027 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZC3HC1Q86WB0 502 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 OR8H3Q8N146 312 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 ARFGAP1Q8N6T3 406 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 NANOGP1Q8N7R0 232 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 RBM15BQ8NDT2 890 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZNF548Q8NEK5 533 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 CSNK2A3Q8NEV1 391 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 GOT1L1Q8NHS2 421 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 C16orf52Q8NHV5 167 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 KIF18AQ8NI77 898 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 RND1Q92730 232 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SLC25A28Q96A46 364 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 GRAMD2BQ96HH9 432 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 FER1L6-AS2Q96M78 137 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 JAKMIP1Q96N16 626 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SMC6Q96SB8 1091 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SH3GL2Q99962 352 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 NAA11Q9BSU3 229 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 SLCO5A1Q9H2Y9 848 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 KCNK15Q9H427 330 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 MMP25Q9NPA2 562 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 PFDN4Q9NQP4 134 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms