RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CFAP99D6REC4 459 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 K7EPI3 171 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ABCB7O75027 752 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 TULP3O75386 442 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 CLPXO76031 633 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PEX11BO96011 259 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 CYBBP04839 570 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ENO2P09104 434 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 LINC00032P0C843 101 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 SLC2A3P11169 496 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 CDH1P12830 882 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ZNF182P17025 639 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ZFP36L2P47974 494 aaKnown RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PSMD7P51665 324 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ARSDP51689 593 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ACVR1Q04771 509 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 OR4D1Q15615 310 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PFKFB4Q16877 469 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PRR23BQ6ZRT6 265 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 IFNEQ86WN2 208 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ZC3H7AQ8IWR0 971 aaKnown RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 RIMKLAQ8IXN7 391 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 GPC2Q8N158 579 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 TMEM199Q8N511 208 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PEX13Q92968 403 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 MYLPFQ96A32 169 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 CHID1Q9BWS9 393 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 BRINP2Q9C0B6 783 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PFDN4Q9NQP4 134 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PCDHGA11Q9Y5H2 935 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 H0Y858 1186 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 DYNC1LI2O43237 492 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PRSS23O95084 383 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 NCK1P16333 377 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ZNF37AP17032 561 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ALDH3A2P51648 485 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 CCR3P51677 355 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 TIAL1Q01085 375 aaKnown RBP eCLIP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 EMX2Q04743 252 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 CLCQ05315 142 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 NR1D2Q14995 579 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 PLCL1Q15111 1095 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 RGS21Q2M5E4 152 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ZNF549Q6P9A3 640 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 LDB1Q86U70 411 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 SLC15A4Q8N697 577 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 SNX19Q92543 992 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ZFP42Q96MM3 310 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 GLT1D1Q96MS3 346 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 RDH12Q96NR8 316 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 SMOC2Q9H3U7 446 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 TLR9Q9NR96 1032 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 ABCC13Q9NSE7 274 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 SELENONQ9NZV5 590 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 MAGEL2Q9UJ55 1249 aa17.54■□□□□ 0.4
SDCBP-202ENST00000413219 TIMM13Q9Y5L4 95 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 NYNRINQ9P2P1 1898 aaKnown RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 LRRC14BA6NHZ5 514 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 F2P00734 622 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 HPRP00739 348 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 BDNFP23560 247 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 GSTM2P28161 218 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 CD86P42081 329 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 YAP1P46937 504 aaKnown RBP17.53■□□□□ 0.4
SDCBP-202ENST00000413219 APLP1P51693 650 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 CRYBB1P53674 252 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-202ENST00000413219 ARSFP54793 590 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 DIO3P55073 304 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 PAGE3Q5JUK9 113 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 XAF1Q6GPH4 301 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 TBPL2Q6SJ96 375 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 KIAA2013Q8IYS2 634 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 GPRC5AQ8NFJ5 357 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 MUS81Q96NY9 551 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 NSUN5Q96P11 429 aaKnown RBP17.53■□□□□ 0.4
SDCBP-202ENST00000413219 KCNA7Q96RP8 456 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 SOX17Q9H6I2 414 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-202ENST00000413219 NT5MQ9NPB1 228 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 BTRCQ9Y297 605 aa17.53■□□□□ 0.4
SDCBP-202ENST00000413219 CCDC154A6NI56 674 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 E9PAM4 449 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 KERAO60938 352 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 DEAF1O75398 565 aaPredicted RBP17.52■□□□□ 0.4
SDCBP-202ENST00000413219 SLC4A1P02730 911 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 EEF1B2P24534 225 aaKnown RBP17.52■□□□□ 0.4
SDCBP-202ENST00000413219 HRH2P25021 359 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 ADAM17P78536 824 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 DAG1Q14118 895 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 IQSEC1Q6DN90 963 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 GTF2IRD2BQ6EKJ0 949 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 TWF2Q6IBS0 349 aaKnown RBP17.52■□□□□ 0.4
SDCBP-202ENST00000413219 MRNIPQ6NTE8 343 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 TAF2Q6P1X5 1199 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 NCCRP1Q6ZVX7 275 aaPredicted RBP17.52■□□□□ 0.4
SDCBP-202ENST00000413219 GTF2IRD2Q86UP8 949 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 RYBPQ8N488 228 aaPredicted RBP17.52■□□□□ 0.4
SDCBP-202ENST00000413219 PNPLA1Q8N8W4 532 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 SH3RF2Q8TEC5 729 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 TADA1Q96BN2 335 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms