RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 ZSWIM1Q9BR11 485 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 CAPS2Q9BXY5 557 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 ATP13A1Q9HD20 1204 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 APMAPQ9HDC9 416 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 TMEM59LQ9UK28 342 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 AJAP1Q9UKB5 411 aaPredicted RBP6.93□□□□□ -1.3
LSM8-202ENST00000411938 CROTQ9UKG9 612 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 NFU1Q9UMS0 254 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 TMEM184BQ9Y519 407 aaPredicted RBP6.93□□□□□ -1.3
LSM8-202ENST00000411938 PCDHB4Q9Y5E5 795 aa6.93□□□□□ -1.3
LSM8-202ENST00000411938 ZNF106Q9H2Y7 1883 aaKnown RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 IGHV1OR21-1A0A087WYE8 117 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ESYT3A0FGR9 886 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ANKUB1A6NFN9 424 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ZSCAN5CA6NGD5 496 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 BHMG1C9JSJ3 638 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 PRSS44E7EML9 344 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 F8VZ95 297 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 POLR1CO15160 346 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 CREG1O75629 220 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ZMPSTE24O75844 475 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 CBX6O95503 412 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 POP4O95707 220 aaKnown RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 DLGAP3O95886 979 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 FGF1P05230 155 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 GLI1P08151 1106 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 KELP23276 732 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 SOX5P35711 763 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 CARSP49589 748 aaKnown RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 CCL11P51671 97 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 CORO7P57737 925 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 MRPS25P82663 173 aaKnown RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 ENPEPQ07075 957 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 CHAF1BQ13112 559 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 MTM1Q13496 603 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 SQSTM1Q13501 440 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 EIF4EBP2Q13542 120 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 SEMA5AQ13591 1074 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 POLD3Q15054 466 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 TAF5Q15542 800 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 MYLK3Q32MK0 819 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 C5orf22Q49AR2 442 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 C6orf15Q6UXA7 325 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 LRIG3Q6UXM1 1119 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 GDPD4Q6W3E5 623 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 SLFN11Q7Z7L1 901 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 C17orf82Q86X59 251 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 DEFB106AQ8N104 65 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 RASGEF1CQ8N431 466 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 PATE1Q8WXA2 126 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ZBTB9Q96C00 473 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 AHCYL2Q96HN2 611 aaKnown RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 LURAP1Q96LR2 239 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 OSBPL1AQ9BXW6 950 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 SLC4A5Q9BY07 1137 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ULBP3Q9BZM4 244 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ISCUQ9H1K1 167 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 FBXO8Q9NRD0 319 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 MPP6Q9NZW5 540 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 RSPH14Q9UHP6 348 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 LCMT1Q9UIC8 334 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 PACSIN2Q9UNF0 486 aaPredicted RBP6.92□□□□□ -1.3
LSM8-202ENST00000411938 ZNF451Q9Y4E5 1061 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 SNX10Q9Y5X0 201 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 ACTL7AQ9Y615 435 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 TACC2O95359 2948 aa6.92□□□□□ -1.3
LSM8-202ENST00000411938 CROCCQ5TZA2 2017 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 ILVBLA1L0T0 632 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 HMGB1P1B2RPK0 211 aaPredicted RBP6.91□□□□□ -1.3
LSM8-202ENST00000411938 E5RJQ4 531 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 DDX3XO00571 662 aaKnown RBP eCLIP6.91□□□□□ -1.35e-28■■■■□ 20.5
LSM8-202ENST00000411938 TNFRSF10CO14798 259 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 PPM1DO15297 605 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 CEP104O60308 925 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 DPM1O60762 260 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 CPP00450 1065 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 TMEM253P0C7T8 217 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 CCDC172P0C7W6 258 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 CCNB1P14635 433 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 TBXAS1P24557 533 aaPredicted RBP6.91□□□□□ -1.3
LSM8-202ENST00000411938 ECHS1P30084 290 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 GPD2P43304 727 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 FMO5P49326 533 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 PER3P56645 1201 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 KIAA1024LP59773 190 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 RNASE9P60153 205 aaKnown RBP6.91□□□□□ -1.3
LSM8-202ENST00000411938 SNRPD1P62314 119 aaKnown RBP6.91□□□□□ -1.3
LSM8-202ENST00000411938 ARF5P84085 180 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 ILF3Q12906 894 aaKnown RBP eCLIP6.91□□□□□ -1.3
LSM8-202ENST00000411938 MAP7Q14244 749 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 TMEM52BQ4KMG9 183 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 DNAJC21Q5F1R6 531 aaKnown RBP6.91□□□□□ -1.3
LSM8-202ENST00000411938 ATXN7L2Q5T6C5 722 aaPredicted RBP6.91□□□□□ -1.3
LSM8-202ENST00000411938 CPZQ66K79 652 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 SLC6A19Q695T7 634 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 DENND1BQ6P3S1 775 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 SLC30A9Q6PML9 568 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 LYSMD3Q7Z3D4 306 aa6.91□□□□□ -1.3
LSM8-202ENST00000411938 PEX26Q7Z412 305 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms