RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ARHGAP10A1A4S6 786 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 LINC01553A4QN01 128 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 A6NCN8 305 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 PABPN1LA6NDY0 278 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 USP27XA6NNY8 438 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TAF4O00268 1085 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CTAGE5O15320 804 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TGFB1I1O43294 461 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 HTATSF1O43719 755 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 DOK2O60496 412 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 NEURL1O76050 574 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CBX6O95503 412 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 IL1AP01583 271 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 SPARCP09486 303 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TPM1P09493 284 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 NEFHP12036 1026 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CD72P21854 359 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CALRP27797 417 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 FMO4P31512 558 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 SLC16A2P36021 539 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CPOXP36551 454 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 SSR1P43307 286 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 AMTP48728 403 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 MRPL12P52815 198 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 NUDT6P53370 316 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 ATP12AP54707 1039 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 UBE2HP62256 183 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 IRX1P78414 480 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TMF1P82094 1093 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCZ1BP86790 482 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCZ1P86791 482 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 NEXNQ0ZGT2 675 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 LRMPQ12912 555 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TRAF3Q13114 568 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 DCTN2Q13561 401 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 KCTD2Q14681 263 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 FCN2Q15485 313 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 SLC1A5Q15758 541 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 BSPRYQ5W0U4 402 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 FAM205BPQ63HN1 556 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TBC1D9BQ66K14 1250 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 KLHL24Q6TFL4 600 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCDC186Q7Z3E2 898 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 ANKRD23Q86SG2 305 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TADA2BQ86TJ2 420 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 IGFN1Q86VF2 1251 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 WDR5BQ86VZ2 330 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 LRRC8AQ8IWT6 810 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 RPAP2Q8IXW5 612 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCAR2Q8N163 923 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 GPATCH11Q8N954 259 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCDC89Q8N998 374 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 WDSUB1Q8N9V3 476 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 DNAAF1Q8NEP3 725 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 ANKRD20A12PQ8NF67 263 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 SPATA20Q8TB22 786 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 NEK9Q8TD19 979 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 KCNG4Q8TDN1 519 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 TMEM170AQ8WVE7 144 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 FAR1Q8WVX9 515 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 USP6NLQ92738 828 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 GTF3C6Q969F1 213 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 KLHL29Q96CT2 875 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 RSRC1Q96IZ7 334 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 ADGRG7Q96K78 797 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 KLHL15Q96M94 604 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 C16orf45Q96MC5 204 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 NEUROD6Q96NK8 337 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 ITPAQ9BY32 194 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 FUT8Q9BYC5 575 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 GHITMQ9H3K2 345 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 HIPK3Q9H422 1215 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 SLC32A1Q9H598 525 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 ZCCHC17Q9NP64 241 aaKnown RBP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 PCDHB16Q9NRJ7 776 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 RNF146Q9NTX7 359 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 BABAM1Q9NWV8 329 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 KIAA1456Q9P272 454 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 NLKQ9UBE8 527 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 IL36RNQ9UBH0 155 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 GPR34Q9UPC5 381 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 RABGAP1Q9Y3P9 1069 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 LYVE1Q9Y5Y7 322 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 RPS6KL1Q9Y6S9 549 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 ADGRB2O60241 1585 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 A2MP01023 1474 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 SHANK2Q9UPX8 1470 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 C9orf84Q5VXU9 1444 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 PDS5BQ9NTI5 1447 aa2.51□□□□□ -2.01
HMGB3P2-201ENST00000411913 MYOM1P52179 1685 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ITSN2Q9NZM3 1697 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 KDRP35968 1356 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 KIF24Q5T7B8 1368 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 NESP48681 1621 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 EIF2AK4Q9P2K8 1649 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 PHLPP2Q6ZVD8 1323 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ATXN2Q99700 1313 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SAA2-SAA4A0A096LPE2 208 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms