RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 CNDP2Q96KP4 475 aaKnown RBP7.27□□□□□ -1.24
SCN9A-202ENST00000409435 TMEM237Q96Q45 408 aa7.27□□□□□ -1.24
SCN9A-202ENST00000409435 SEMA3CQ99985 751 aa7.27□□□□□ -1.24
SCN9A-202ENST00000409435 PPCSQ9HAB8 311 aa7.27□□□□□ -1.24
SCN9A-202ENST00000409435 KRCC1Q9NPI7 259 aaPredicted RBP7.27□□□□□ -1.24
SCN9A-202ENST00000409435 NCF1BA6NI72 391 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 NCF1CA8MVU1 366 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 NOS1APO75052 506 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 NCF1P14598 390 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 INHBCP55103 352 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 GCNT1Q02742 428 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ABRQ12979 859 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PDIA2Q13087 525 aaKnown RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PRRT3Q5FWE3 981 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ANKRD26P1Q6NSI1 321 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 HMBOX1Q6NT76 420 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 FNIP1Q8TF40 1166 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 TBL1YQ9BQ87 522 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 MAGEH1Q9H213 219 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 FZD8Q9H461 694 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 BPIFA1Q9NP55 256 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 NUP50Q9UKX7 468 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 L1RE1Q9UN81 338 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 RAD54BQ9Y620 910 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 O00370 1275 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 APOC1P02654 83 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 SPRP35270 261 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PSMD4P55036 377 aaKnown RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ERVFC1P60507 584 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 AP1S1P61966 158 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ADAM17P78536 824 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 GNA12Q03113 381 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 HSF2Q03933 536 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 GSTA3Q16772 222 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 LAIR1Q6GTX8 287 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 EFL1Q7Z2Z2 1120 aaKnown RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 LRP10Q7Z4F1 713 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 FSTL5Q8N475 847 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 C12orf29Q8N999 325 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PIK3C3Q8NEB9 887 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ETNPPLQ8TBG4 499 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 C8orf48Q96LL4 319 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 CASD1Q96PB1 797 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 VAT1Q99536 393 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 COPS8Q99627 209 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 RBBP8Q99708 897 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ZDHHC5Q9C0B5 715 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PNMA8BQ9ULN7 279 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 COL2A1P02458 1487 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 EFCAB7A8K855 629 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ECDO95905 644 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 HBQ1P09105 142 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 SCTRP47872 440 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 RPL19P84098 196 aaKnown RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 EVX2Q03828 476 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 CSHL1Q14406 222 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 SGCBQ16585 318 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 TYSND1Q2T9J0 566 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 KCNT1Q5JUK3 1230 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 RBM20Q5T481 1227 aaKnown RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 KLHDC7AQ5VTJ3 777 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 SNX30Q5VWJ9 437 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PMF1Q6P1K2 205 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ULK3Q6PHR2 472 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 DCP2Q8IU60 420 aaKnown RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 EGFL6Q8IUX8 553 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 CLEC1AQ8NC01 280 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ANKRD7Q92527 254 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 EZH1Q92800 747 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 SLC22A18Q96BI1 424 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 FAIM2Q9BWQ8 316 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 TRABDQ9H4I3 376 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 GPN2Q9H9Y4 310 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 CXXC1Q9P0U4 656 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 CNTN3Q9P232 1028 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF222Q9UK12 451 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PEAK1Q9H792 1746 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 LRP5O75197 1615 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 TTLL8A6PVC2 850 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 TMEM150CB9EJG8 249 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 C9IYK1 514 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 MATN2O00339 956 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 C5AR1P21730 350 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 AMPD1P23109 780 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PSMB9P28065 219 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 MAGEA11P43364 429 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PSME3P61289 254 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 TRAF2Q12933 501 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 CRY1Q16526 586 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 PTPN21Q16825 1174 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 GJB7Q6PEY0 223 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 TMIEQ8NEW7 156 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 RIT1Q92963 219 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 WDR92Q96MX6 357 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 FAM126AQ9BYI3 521 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 SLC2A11Q9BYW1 496 aa7.27□□□□□ -1.25
SCN9A-202ENST00000409435 XPO7Q9UIA9 1087 aaKnown RBP7.27□□□□□ -1.25
SCN9A-202ENST00000409435 A0A1W2PQ72 361 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 HIDE1A8MVS5 230 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 AIM2O14862 343 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms