RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 BGNP21810 368 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 ZNF132P52740 706 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 FNBP1LQ5T0N5 605 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 C11orf63Q6NUN7 778 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 PRSS55Q6UWB4 352 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 TMPRSS11BQ86T26 416 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 MTDHQ86UE4 582 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 CROCCP3Q8IVE0 287 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 FAM13CQ8NE31 585 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 ZSCAN5AQ9BUG6 496 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 GMIPQ9P107 970 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 CROTQ9UKG9 612 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 IFT52Q9Y366 437 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 NTRK3Q16288 839 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 PLEKHG6Q3KR16 790 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 OGFRL1Q5TC84 451 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 MAGEE2Q8TD90 523 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 RIT1Q92963 219 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 HAVCR1Q96D42 359 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 PTPN18Q99952 460 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 DDX18Q9NVP1 670 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 KBTBD4Q9NVX7 518 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 EVLQ9UI08 416 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 ZNF225Q9UK10 706 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 VPS4AQ9UN37 437 aa10.94□□□□□ -0.66
CACNA1C-210ENST00000399606 LDLRP01130 860 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ASMTP46597 345 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PLK1P53350 603 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 MAXP61244 160 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 TAF10Q12962 218 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 DEFB107AQ8IZN7 70 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ASB12Q8WXK4 309 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 HEBP2Q9Y5Z4 205 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 DUSP11O75319 330 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 TRUB2O95900 331 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ZNF8P17098 575 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CXCR3P49682 368 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 STXBP5Q5T5C0 1151 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 KLHDC7AQ5VTJ3 777 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 OAFQ86UD1 273 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ZSCAN4Q8NAM6 433 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 C7orf57Q8NEG2 295 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 SLC22A8Q8TCC7 542 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 AP2M1Q96CW1 435 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PHF24Q9UPV7 400 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 GMEB1Q9Y692 573 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 A0A0X1KG70 313 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 TCRBV21S2A2A0A5A6 115 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CLOCKO15516 846 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 SLC35G6P0C7Q6 338 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 HOXB2P14652 356 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 MANFP55145 182 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ACTR3P61158 418 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ELF3P78545 371 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ROR2Q01974 943 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CBX3Q13185 183 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 NUP54Q7Z3B4 507 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 KYQ8NBH2 561 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 RDH11Q8TC12 318 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 TAS1R2Q8TE23 839 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 SEMA3CQ99985 751 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CHID1Q9BWS9 393 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ZNF717Q9BY31 904 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 B3GAT2Q9NPZ5 323 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 NDUFAF1Q9Y375 327 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CNTNAP1P78357 1384 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 LOC100506127A0A0U1RQW1 187 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PTGES3LE9PB15 166 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 NARSO43776 548 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 LSM8O95777 96 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 KCNMA1Q12791 1236 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ZNF846Q147U1 533 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 TCHHL1Q5QJ38 904 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 UBXN11Q5T124 520 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ALG1LQ6GMV1 187 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 SLC8B1Q6J4K2 584 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 COMTD1Q86VU5 262 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 UNC5BQ8IZJ1 945 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 C9orf16Q9BUW7 83 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 NUAK2Q9H093 628 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 NCKIPSDQ9NZQ3 722 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 WHRNQ9P202 907 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ERCC6L2Q5T890 1561 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 DDX3XO00571 662 aaKnown RBP eCLIP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PPM1BO75688 479 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 SYNGR4O95473 234 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PTPN4P29074 926 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 HNF1BP35680 557 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ACLYP53396 1101 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 FASTKQ14296 549 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 RTL4Q6ZR62 310 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ZZZ3Q8IYH5 903 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 HTR3CQ8WXA8 447 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms