RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 NDST2P52849 883 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 MTTPP55157 894 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 FAM182AQ5T1J6 154 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 EGFLAMQ63HQ2 1017 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 EIF3MQ7L2H7 374 aaKnown RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 ADGRG6Q86SQ4 1221 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 ERI1Q8IV48 349 aaKnown RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 DNAJC1Q96KC8 554 aaKnown RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 FAM25AB3EWG3 89 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 FAM25CB3EWG5 89 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 FAM25GB3EWG6 89 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 DLX3O60479 287 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 RNASEH1O60930 286 aaKnown RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 USP2O75604 605 aaPredicted RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 FGF3P11487 239 aaPredicted RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 PLD1Q13393 1074 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 MCFD2Q8NI22 146 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 PIGVQ9NUD9 493 aa16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 IFT80Q9P2H3 777 aaPredicted RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 ARIH1Q9Y4X5 557 aaPredicted RBP16.31■□□□□ 0.2
CTDSP2-201ENST00000398073 PDE9AO76083 593 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 TSPAN19P0C672 248 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 RAB15P59190 212 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CDHR3Q6ZTQ4 885 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 ARL10Q8N8L6 244 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 LPIN3Q9BQK8 851 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 LRTM1Q9HBL6 345 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CLN6Q9NWW5 311 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 MYH7BA7E2Y1 1941 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 OR6C75A6NL08 312 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 GABRDO14764 452 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 TOP3BO95985 862 aaKnown RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 IMPDH1P20839 514 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 SNRPD1P62314 119 aaKnown RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 MERTKQ12866 999 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 KLHDC10Q6PID8 442 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CERS6Q6ZMG9 384 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 ELMO1Q92556 727 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 VPS35Q96QK1 796 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CCDC106Q9BWC9 280 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 NDEL1Q9GZM8 345 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 USP29Q9HBJ7 922 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 NUDT4Q9NZJ9 180 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 MYH3P11055 1940 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 MATN2O00339 956 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 TREHO43280 583 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CLDN11O75508 207 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 ZBTB11O95625 1053 aaPredicted RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 ZNF12P17014 697 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 OGNP20774 298 aaKnown RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 PAFAH1B3Q15102 231 aaKnown RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 GALNT18Q6P9A2 607 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 COPS8Q99627 209 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 MIPEPQ99797 713 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 NFKBIZQ9BYH8 718 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 XYLT2Q9H1B5 865 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 FANCEQ9HB96 536 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 ZDHHC2Q9UIJ5 367 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CNOT6Q9ULM6 557 aaKnown RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 SGTAO43765 313 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 SCELO95171 688 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 LINGO3P0C6S8 592 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 RPL3P39023 403 aaKnown RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CLCNKBP51801 687 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 RHDQ02161 417 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 NRG1Q02297 640 aaPredicted RBP16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CLEC20AQ6ZU45 233 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 KCTD8Q6ZWB6 473 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 CANT1Q8WVQ1 401 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 PKP2Q99959 881 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 SLC39A8Q9C0K1 460 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 ZBTB26Q9HCK0 441 aa16.3■□□□□ 0.2
CTDSP2-201ENST00000398073 STX16-NPEPL1H3BU86 382 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 BCKDKO14874 412 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 SERPINI2O75830 405 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 GOT2P00505 430 aaKnown RBP16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 CYP4B1P13584 511 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 IGFBP5P24593 272 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 IL12RB1P42701 662 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 SAPCD2Q86UD0 394 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 TMEM126BQ8IUX1 230 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 SPPL2BQ8TCT7 592 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 TSSK3Q96PN8 268 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 CHID1Q9BWS9 393 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 PCDH12Q9NPG4 1184 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 SLC27A5Q9Y2P5 690 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 SUV39H1O43463 412 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 ANGPTL1O95841 491 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 CMPK2Q5EBM0 449 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 METTL3Q86U44 580 aaKnown RBP16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 RAB2BQ8WUD1 216 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 Q96MT0 163 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 DEPDC7Q96QD5 511 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 RAPGEFL1Q9UHV5 662 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 CTPS1P17812 591 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 CHRNA4P43681 627 aa16.29■□□□□ 0.2
CTDSP2-201ENST00000398073 FAM151BQ6UXP7 276 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms