RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 ELOVL7A1L3X0 281 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 TBL1XO60907 577 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 SERPINA3P01011 423 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 FGF1P05230 155 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 ZNF567Q8N184 647 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 PRRG4Q9BZD6 226 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 TMPRSS4Q9NRS4 437 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 LYPLA1O75608 230 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 OR7A10O76100 309 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 POM121L1PQ3SYA9 428 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 TIGD2Q4W5G0 525 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 ZNF548Q8NEK5 533 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 VANGL1Q8TAA9 524 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 ACOT12Q8WYK0 555 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 CLPTM1LQ96KA5 538 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 NPEPPSL1A6NEC2 478 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 BUD23O43709 281 aaKnown RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 EDF1O60869 148 aaKnown RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 BTG3Q14201 252 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 POTEHQ6S545 545 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 GPR65Q8IYL9 337 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 COMMD4Q9H0A8 199 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 EQTNQ9NQ60 294 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 PRKAB1Q9Y478 270 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 CD163L1Q9NR16 1453 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 hCG_1818297A0A087WSY0 165 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 TNFRSF11BO00300 401 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 PDE2AO00408 941 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 RB1P06400 928 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 BPGMP07738 259 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 AQP1P29972 269 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 SEMA5AQ13591 1074 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 ZZZ3Q8IYH5 903 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 NODALQ96S42 347 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 SMCO3A2RU48 225 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 HTR1BP28222 390 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 FAM35AQ86V20 835 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 EHD1Q9H4M9 534 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 TMEM134Q9H6X4 195 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 LRTM1Q9HBL6 345 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 FBXL21Q9UKT6 434 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 ZNF208O43345 1280 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 CA9Q16790 459 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 DCST1Q5T197 706 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 USP43Q70EL4 1123 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 TRABD2AQ86V40 505 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PGAM4Q8N0Y7 254 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 OR5T3Q8NGG3 340 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PPM1MQ96MI6 270 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 KCNQ5Q9NR82 932 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 ARL8BQ9NVJ2 186 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 MRPS33Q9Y291 106 aaKnown RBP13.91□□□□□ -0.18
COL4A3-202ENST00000396578 TULP3O75386 442 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 DNASE1L1P49184 302 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 GCNT6Q5T4J0 391 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 CLNKQ7Z7G1 428 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 KLHL5Q96PQ7 755 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 ALG2Q9H553 416 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 GPN3Q9UHW5 284 aaPredicted RBP13.91□□□□□ -0.18
COL4A3-202ENST00000396578 MEMO1Q9Y316 297 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PAPSS2O95340 614 aaPredicted RBP13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PSKH1P11801 424 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 KCNA5P22460 613 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 MC4RP32245 332 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 SLC30A10Q6XR72 485 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 SMIM5Q71RC9 77 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PRELID2Q8N945 189 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 RHOJQ9H4E5 214 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 EIF3KQ9UBQ5 218 aaKnown RBP13.91□□□□□ -0.18
COL4A3-202ENST00000396578 ECT2LQ008S8 904 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 FAM151BQ6UXP7 276 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 FBXL16Q8N461 479 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 HEXDCQ8WVB3 486 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 HSFY1Q96LI6 401 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 UROC1Q96N76 676 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PORCNQ9H237 461 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 VWA7Q9Y334 891 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 ISM1B1AKI9 464 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 GRIN3BO60391 1043 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 TFPIP10646 304 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 CARTPTQ16568 116 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PARGQ86W56 976 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PLCZ1Q86YW0 608 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 SVOPLQ8N434 492 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 GRHL1Q9NZI5 618 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 SLIT1O75093 1534 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 ADAMDEC1O15204 470 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 AKT2P31751 481 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 CBX2Q14781 532 aaPredicted RBP13.91□□□□□ -0.18
COL4A3-202ENST00000396578 ZCCHC12Q6PEW1 402 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 PNPT1Q8TCS8 783 aaKnown RBP13.91□□□□□ -0.18
COL4A3-202ENST00000396578 MCMBPQ9BTE3 642 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 BLOC1S4Q9NUP1 217 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 NWD1Q149M9 1564 aa13.91□□□□□ -0.18
COL4A3-202ENST00000396578 AKAP8O43823 692 aaKnown RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PIAS1O75925 651 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms