RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 CCDC85CA6NKD9 419 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 DNAJC8O75937 253 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 GUCA1CO95843 209 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 CD1DP15813 335 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 C18orf21Q32NC0 220 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 SETMARQ53H47 684 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 PTRHD1Q6GMV3 140 aaKnown RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 LKAAEAR1Q8TD35 194 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 CATSPER2Q96P56 530 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 KCNA7Q96RP8 456 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 SUV39H2Q9H5I1 410 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 MBD1Q9UIS9 605 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 B2RBV5 119 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 IPO13O94829 963 aaKnown RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 CYP17A1P05093 508 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 XIAPP98170 497 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 MPP7Q5T2T1 576 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 CRTC1Q6UUV9 634 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 PIWIL4Q7Z3Z4 852 aaKnown RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 SKA2Q8WVK7 121 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 LINGO1Q96FE5 620 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 SLC28A3Q9HAS3 691 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 SEMA4BQ9NPR2 832 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 RNF112Q9ULX5 631 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 TNRC18O15417 2968 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 H0Y3Z8 333 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 GYG2O15488 501 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 ATP5F1P24539 256 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-202ENST00000394729 WASP42768 502 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 EPHA5P54756 1037 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 OR2A12Q8NGT7 310 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 HTATIP2Q9BUP3 242 aa20.22■□□□□ 0.83
PRKCD-202ENST00000394729 PKMP14618 531 aaKnown RBP20.21■□□□□ 0.83
PRKCD-202ENST00000394729 DGKGP49619 791 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 RPL14P50914 215 aaKnown RBP20.21■□□□□ 0.83
PRKCD-202ENST00000394729 TSNAXIP1Q2TAA8 658 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 SEL1L3Q68CR1 1132 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 SCIMPQ6UWF3 145 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 NPAS3Q8IXF0 933 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 GPR65Q8IYL9 337 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 PBXIP1Q96AQ6 731 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 SLC45A3Q96JT2 553 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 HBEGFQ99075 208 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 DRC3Q9H069 523 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 B4GALT6Q9UBX8 382 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 CIDEBQ9UHD4 219 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 TRMT6Q9UJA5 497 aaKnown RBP20.21■□□□□ 0.83
PRKCD-202ENST00000394729 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.21■□□□□ 0.83
PRKCD-202ENST00000394729 KPNA3O00505 521 aaPredicted RBP20.21■□□□□ 0.83
PRKCD-202ENST00000394729 ZNF195O14628 629 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 TULP3O75386 442 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 PENKP01210 267 aaPredicted RBP20.21■□□□□ 0.83
PRKCD-202ENST00000394729 NME5P56597 212 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 DBN1Q16643 649 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 NSL1Q96IY1 281 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 BRD9Q9H8M2 597 aa20.21■□□□□ 0.83
PRKCD-202ENST00000394729 PPP1R3AQ16821 1122 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 CARD16Q5EG05 197 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 ELMSAN1Q6PJG2 1045 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 ASRGL1Q7L266 308 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 RAB3IL1Q8TBN0 382 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 TRPC4APQ8TEL6 797 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 ASB1Q9Y576 335 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 GBF1Q92538 1859 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 GLYATL1P3A0A0U1RQE8 302 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 PRRT4C9JH25 899 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 UBFD1O14562 309 aaKnown RBP20.2■□□□□ 0.82
PRKCD-202ENST00000394729 APOA4P06727 396 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 ADH5P11766 374 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 CES1P23141 567 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 HNRNPH1P31943 449 aaKnown RBP20.2■□□□□ 0.82
PRKCD-202ENST00000394729 TTPAP49638 278 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 SLC25A3Q00325 362 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 PFKPQ01813 784 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 CCDC15Q0P6D6 951 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 TUBB3Q13509 450 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 LAMB3Q13751 1172 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 ACAP2Q15057 778 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 E2F5Q15329 346 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 TYSND1Q2T9J0 566 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 ZNF398Q8TD17 642 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 LMLNQ96KR4 655 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 WRAP53Q9BUR4 548 aaKnown RBP20.2■□□□□ 0.82
PRKCD-202ENST00000394729 MAGEE1Q9HCI5 957 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 CD248Q9HCU0 757 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.2■□□□□ 0.82
PRKCD-202ENST00000394729 ERVW-1Q9UQF0 538 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 RWDD3Q9Y3V2 267 aa20.2■□□□□ 0.82
PRKCD-202ENST00000394729 CCDC189A1A4V9 331 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 C5orf67F2Z3F1 127 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 GAPDHSO14556 408 aaPredicted RBP20.19■□□□□ 0.82
PRKCD-202ENST00000394729 RASSF9O75901 435 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 COL6A2P12110 1019 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 OGNP20774 298 aaKnown RBP20.19■□□□□ 0.82
PRKCD-202ENST00000394729 NFATC2Q13469 925 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 OR6Y1Q8NGX8 325 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 TCF7L2Q9NQB0 619 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 SAR1AQ9NR31 198 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 HS3ST2Q9Y278 367 aa20.19■□□□□ 0.82
PRKCD-202ENST00000394729 L3MBTL1Q9Y468 752 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms