RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CMTR2Q8IYT2 770 aaKnown RBP11.08□□□□□ -0.64
TCOF1-203ENST00000394269 LPGAT1Q92604 370 aa11.08□□□□□ -0.64
TCOF1-203ENST00000394269 N4BP2L2Q92802 583 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-203ENST00000394269 EID2BQ96D98 161 aa11.08□□□□□ -0.64
TCOF1-203ENST00000394269 BBS2Q9BXC9 721 aa11.08□□□□□ -0.64
TCOF1-203ENST00000394269 ZFYVE1Q9HBF4 777 aa11.08□□□□□ -0.64
TCOF1-203ENST00000394269 MYOFQ9NZM1 2061 aa11.08□□□□□ -0.64
TCOF1-203ENST00000394269 A0A1B0GTL3 188 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 RGSL1A5PLK6 1076 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 TRPC5OSA6NMA1 111 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 F8W8V4 182 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 UBDO15205 165 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 PFDN6O15212 129 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CLASP2O75122 1294 aaKnown RBP11.07□□□□□ -0.64
TCOF1-203ENST00000394269 PYGLP06737 847 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CTSAP10619 480 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 IMPDH1P20839 514 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 PPARGP37231 505 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-203ENST00000394269 PPP3CCP48454 512 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CSRP3P50461 194 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 RPS6KA2Q15349 733 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 DGKKQ5KSL6 1271 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 ATP6V1E2Q96A05 226 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CCDC126Q96EE4 140 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CDK15Q96Q40 435 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 MCOLN1Q9GZU1 580 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 MTG2Q9H4K7 406 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 SYTL2Q9HCH5 934 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 STOML1Q9UBI4 398 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 VTI1BQ9UEU0 232 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CD84Q9UIB8 345 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 SDHDO14521 159 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 KATNA1O75449 491 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 UGT2B4P06133 528 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 MYOGP15173 224 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CREB5Q02930 508 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 RBBP7Q16576 425 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 UNC50Q53HI1 259 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 ZNF678Q5SXM1 525 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 STAG3L4Q8TBR4 150 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 MAGEC3Q8TD91 643 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 TUBGCP3Q96CW5 907 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.07□□□□□ -0.64
TCOF1-203ENST00000394269 WBP1LQ9NX94 342 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CDH22Q9UJ99 828 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CRLS1Q9UJA2 301 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 GIPC1O14908 333 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 NPHS1O60500 1241 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 ECI2O75521 394 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 ALOX15P16050 662 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CASP2P42575 452 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 GJA8P48165 433 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 TTPAP49638 278 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 IL2P60568 153 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 C18orf21Q32NC0 220 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-203ENST00000394269 PLEKHG6Q3KR16 790 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 FRA10AC1Q70Z53 315 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 DET1Q7L5Y6 550 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 LCA5Q86VQ0 697 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 C7orf61Q8IZ16 206 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 KYQ8NBH2 561 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 POF1BQ8WVV4 589 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 C3orf30Q96M34 536 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 C17orf80Q9BSJ5 609 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 CIPCQ9C0C6 399 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 YY1AP1Q9H869 796 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 INTS6Q9UL03 887 aaKnown RBP11.07□□□□□ -0.64
TCOF1-203ENST00000394269 TRIOO75962 3097 aa11.07□□□□□ -0.64
TCOF1-203ENST00000394269 SLCO1B7G3V0H7 640 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 MAGEC1O60732 1142 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 OGNP20774 298 aaKnown RBP11.06□□□□□ -0.64
TCOF1-203ENST00000394269 PRDX3P30048 256 aaKnown RBP11.06□□□□□ -0.64
TCOF1-203ENST00000394269 HLA-FP30511 346 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 HNF1BP35680 557 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 CLNS1AP54105 237 aaKnown RBP11.06□□□□□ -0.64
TCOF1-203ENST00000394269 RFLNAQ6ZTI6 216 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 LMNTD2Q8IXW0 634 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 DSELQ8IZU8 1212 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 ACOX2Q99424 681 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 CLPBQ9H078 707 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 GSTO2Q9H4Y5 243 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 LATS2Q9NRM7 1088 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 KIAA1522Q9P206 1035 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-203ENST00000394269 PPM1HQ9ULR3 514 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 MIA3Q5JRA6 1907 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 GREM1O60565 184 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 CA5AP35218 305 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 IRS1P35568 1242 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 HERVK_113P63132 956 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 MPPE1Q53F39 396 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 INO80DQ53TQ3 878 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-203ENST00000394269 METTL21CQ5VZV1 264 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 CCDC149Q6ZUS6 474 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 Q6ZVU0 165 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 SERPINA9Q86WD7 417 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 DCAF4L2Q8NA75 395 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms