RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 LRCH3Q96II8 777 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 CGREF1Q99674 301 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 CTRCQ99895 268 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 EFHD1Q9BUP0 239 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 LHPPQ9H008 270 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 IFT80Q9P2H3 777 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-204ENST00000394164 ABT1Q9ULW3 272 aaKnown RBP9.93□□□□□ -0.82
PSEN1-204ENST00000394164 HS3ST4Q9Y661 456 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 E9PAM4 449 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 AXIN1O15169 862 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 NCAM2O15394 837 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 IRAK2O43187 625 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 SNAP29O95721 258 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 CAPNS1P04632 268 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 SLC7A1P30825 629 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 CD86P42081 329 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 OCA2Q04671 838 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 PPP1R3AQ16821 1122 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 ALFQ53S48 1182 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 OTUD3Q5T2D3 398 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-204ENST00000394164 PPP4R4Q6NUP7 873 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 DHFR2Q86XF0 187 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 CFAP52Q8N1V2 620 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF420Q8TAQ5 688 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-204ENST00000394164 SH3YL1Q96HL8 342 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-204ENST00000394164 MAELQ96JY0 434 aaKnown RBP9.93□□□□□ -0.82
PSEN1-204ENST00000394164 OLFM1Q99784 485 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 GLOD4Q9HC38 313 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 ITM2CQ9NQX7 267 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 IPO11Q9UI26 975 aaKnown RBP9.93□□□□□ -0.82
PSEN1-204ENST00000394164 TRHDEQ9UKU6 1024 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 CRYL1Q9Y2S2 319 aa9.93□□□□□ -0.82
PSEN1-204ENST00000394164 FAM95CA0A1B0GW59 222 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SLC35E2BP0CK96 405 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 MYF6P23409 242 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 TAS2R39P59534 338 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 FKBP1BP68106 108 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 DSC2Q02487 901 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SLC10A7Q0GE19 358 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 PAGE2BQ5JRK9 111 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 ABRAXAS1Q6UWZ7 409 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SH3RF2Q8TEC5 729 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SLC45A3Q96JT2 553 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 MROQ9BYG7 248 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 LTB4R2Q9NPC1 389 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 GMIPQ9P107 970 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 TCAF1Q9Y4C2 921 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 A0A0U1RQF3 1178 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 CLDN25C9JDP6 229 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF701M0R085 212 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-204ENST00000394164 AGRPO00253 132 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 CLASP2O75122 1294 aaKnown RBP9.92□□□□□ -0.82
PSEN1-204ENST00000394164 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
PSEN1-204ENST00000394164 NPY2RP49146 381 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SEPHS1P49903 392 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SLC12A2P55011 1212 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 TUSC3Q13454 348 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 AQP6Q13520 282 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 MAPRE1Q15691 268 aaKnown RBP9.92□□□□□ -0.82
PSEN1-204ENST00000394164 ATAD3BQ5T9A4 648 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 MFSD14CQ5VZR4 134 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 RAP1GAP2Q684P5 730 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 REP15Q6BDI9 236 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 PM20D1Q6GTS8 502 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 PKN3Q6P5Z2 889 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 FAM171BQ6P995 826 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 KLHDC9Q8NEP7 349 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 APBB2Q92870 758 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 PSMG2Q969U7 264 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 HMCESQ96FZ2 354 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 CYP2S1Q96SQ9 504 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SEPT5Q99719 369 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-204ENST00000394164 PIF1Q9H611 641 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 DNMT3BQ9UBC3 853 aaKnown RBP9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SEPT3Q9UH03 358 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 SLC30A1Q9Y6M5 507 aa9.92□□□□□ -0.82
PSEN1-204ENST00000394164 CDH23Q9H251 3354 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 A0A0U1RQS6 177 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 ATP6AP2A0A1C7CYW4 349 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 TIMM44O43615 452 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 ATP6AP2O75787 350 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 SBK3P0C264 359 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 ARNTP27540 789 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 OXTRP30559 389 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 RPL9P32969 192 aaKnown RBP9.91□□□□□ -0.82
PSEN1-204ENST00000394164 WNT3AP56704 352 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 COPZ1P61923 177 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 IMPG1Q17R60 797 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 C6orf10Q5SRN2 563 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 PIK3R6Q5UE93 754 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 TMEM236Q5W0B7 351 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 DENND5AQ6IQ26 1287 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 TMC5Q6UXY8 1006 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 CYS1Q717R9 158 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 CAMK1DQ8IU85 385 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 CENPLQ8N0S6 344 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-204ENST00000394164 PPHLN1Q8NEY8 458 aaKnown RBP9.91□□□□□ -0.82
PSEN1-204ENST00000394164 GIPC2Q8TF65 315 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 SMIM14Q96QK8 99 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms