RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 TMEM98Q9Y2Y6 226 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 PCYT1BQ9Y5K3 369 aaPredicted RBP11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 IGSF10Q6WRI0 2623 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 TCRBV7S2A1N4TA0A589 114 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GOLGA6CA6NDK9 693 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GOLGA6BA6NDN3 693 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 C5orf60A6NFR6 353 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 INPP4BO15327 924 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 TCEA3O75764 348 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 ZNF189O75820 626 aaPredicted RBP11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GOLGA6DP0CG33 693 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 PNLIPP16233 465 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GLB1P16278 677 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 AK4P27144 223 aaPredicted RBP11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GNPDA1P46926 289 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCZ1BP86790 482 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 CTBSQ01459 385 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 CYP4F3Q08477 520 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 NR1D2Q14995 579 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 ISXQ2M1V0 245 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 C14orf28Q4W4Y0 310 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCDC181Q5TID7 509 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 PDPK2PQ6A1A2 396 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCDC70Q6NSX1 233 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 ZNF438Q7Z4V0 828 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 TRAM1L1Q8N609 369 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 TTC13Q8NBP0 860 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 SLC35B2Q8TB61 432 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 SPATA13Q96N96 652 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 DEPDC7Q96QD5 511 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCDC3Q9BQI4 270 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 ZSCAN5AQ9BUG6 496 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GPR63Q9BZJ6 419 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 RMI1Q9H9A7 625 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 GOLGA6AQ9NYA3 693 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 HACD3Q9P035 362 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 IL17CQ9P0M4 197 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 TAAR2Q9P1P5 351 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 SIRPGQ9P1W8 387 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 MOSPD1Q9UJG1 213 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 R3HDM2Q9Y2K5 976 aaKnown RBP11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 PLEKHM1Q9Y4G2 1056 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 PCDHB1Q9Y5F3 818 aa11.3□□□□□ -0.6
IGHV4-28-201ENST00000390612 A0A1W2PNU3 283 aaPredicted RBP11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 A0A1W2PQM1 296 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 KCNN4O15554 427 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 KRT86O43790 486 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 CSO75390 466 aaKnown RBP11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 KRT37O76014 449 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 ANXA9O76027 345 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 PDX1P52945 283 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 GEMP55040 296 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 ILF3Q12906 894 aaKnown RBP eCLIP11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 KCTD11Q693B1 232 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 DENND5AQ6IQ26 1287 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 DARS2Q6PI48 645 aaKnown RBP11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 DOK6Q6PKX4 331 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 NAGSQ8N159 534 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 IPMKQ8NFU5 416 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCDC74AQ96AQ1 378 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 NXPE2Q96DL1 559 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 PLEKHG4BQ96PX9 1271 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 OR2M4Q96R27 311 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 CARD9Q9H257 536 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 ARNT2Q9HBZ2 717 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 TRIM39Q9HCM9 518 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 RSPH14Q9UHP6 348 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 GUCA1BQ9UMX6 200 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 ENTPD2Q9Y5L3 495 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 RNF215Q9Y6U7 377 aa11.29□□□□□ -0.6
IGHV4-28-201ENST00000390612 PRR19A6NJB7 356 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 GPR89AB7ZAQ6 455 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 GAPDHSO14556 408 aaPredicted RBP11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 CHUKO15111 745 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 NUAK1O60285 661 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 AGTP01019 485 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 ATP1A1P05023 1023 aaKnown RBP11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 GPR89BP0CG08 455 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 PSMB4P28070 264 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 LSSP48449 732 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 CLCNKAP51800 687 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCL7P80098 99 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 B4GALNT1Q00973 533 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 LRP8Q14114 963 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 MEI1Q5TIA1 1274 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 IGF2-ASQ6U949 168 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 RBM44Q6ZP01 1051 aaKnown RBP11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 ARL14Q8N4G2 192 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 SLC25A41Q8N5S1 370 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms