RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ACAD8Q9UKU7 415 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CARD8Q9Y2G2 431 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 KLHL20Q9Y2M5 609 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 LSM4Q9Y4Z0 139 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 STON1Q9Y6Q2 735 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 A0A087WW49 117 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 C17orf113A0A1B0GUU1 675 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 A0A1W2PPI3 338 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 C1orf226A1L170 272 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PABPN1LA6NDY0 278 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 MAGEB17A8MXT2 336 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TEX22C9J3V5 150 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 KRTAP4-16G5E9R7 235 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 STX16-NPEPL1H3BU86 382 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 STX16O14662 325 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PHOX2AO14813 284 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PER2O15055 1255 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SPINT2O43291 252 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ANP32CO43423 234 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TRMUO75648 421 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 CLPTM1O96005 669 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NGFP01138 241 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RAF1P04049 648 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 KRT19P08727 400 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 FRMD6-AS1P0C7T7 363 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 IGHV4-38-2P0DP08 117 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ACADMP11310 421 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TRIM27P14373 513 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF23P17027 643 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 CEBPBP17676 345 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 DDX5P17844 614 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ANXA7P20073 488 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 AGAP20933 346 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 MAOAP21397 527 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NR2F2P24468 414 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NFKBIAP25963 317 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ITGA3P26006 1051 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 EPHA2P29317 976 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PPM1AP35813 382 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SERPINF1P36955 418 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 HNF4AP41235 474 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NKX2-1P43699 371 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TM4SF4P48230 202 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NR2C2P49116 596 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PGFP49763 221 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 BLKP51451 505 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 LIMK2P53671 638 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PRKAA2P54646 552 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RAD23BP54727 409 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SNX16P57768 344 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 CSNK2A1P68400 391 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 DLK1P80370 383 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 MBTD1Q05BQ5 628 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 FOXM1Q08050 763 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ELAVL2Q12926 359 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 EIF4EBP2Q13542 120 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ACVR2BQ13705 512 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 HNRNPDQ14103 355 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 KIR2DS3Q14952 304 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NAA25Q14CX7 972 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RRS1Q15050 365 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PPP2R5BQ15173 497 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NECTIN1Q15223 517 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TAF11Q15544 211 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TIGD6Q17RP2 521 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TCTN1Q2MV58 587 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RNF212Q495C1 297 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 GLIPR1L2Q4G1C9 344 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ASPRV1Q53RT3 343 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SERTAD4-AS1Q5TG53 156 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 CCDC181Q5TID7 509 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ARHGEF16Q5VV41 709 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 GGNBP1Q5YKI7 109 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ALS2CLQ60I27 953 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 HIST2H2BDQ6DRA6 164 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SIGIRRQ6IA17 410 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 FAM166AQ6J272 317 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF280DQ6N043 979 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PGBD2Q6P3X8 592 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 BRAT1Q6PJG6 821 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF704Q6ZNC4 412 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 Q6ZSR9 355 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PLEKHM3Q6ZWE6 761 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 LINGO2Q7L985 606 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SLC46A3Q7Z3Q1 461 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 GPR180Q86V85 440 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 FAM160B2Q86V87 743 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TDRPQ86YL5 185 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 HPS6Q86YV9 775 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SLC35F3Q8IY50 421 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SLC39A11Q8N1S5 342 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 Q8N377 158 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 FGFRL1Q8N441 504 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ZBTB2Q8N680 514 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PCDH20Q8N6Y1 951 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF611Q8N823 705 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RBM15BQ8NDT2 890 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ACVR1CQ8NER5 493 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 CSNK2A3Q8NEV1 391 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RDM1Q8NG50 284 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms