RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CDC16Q13042 620 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 STX5Q13190 355 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 ATXN7L2Q5T6C5 722 aaPredicted RBP22.97■■□□□ 1.27
VPS16-201ENST00000380443 PSAPL1Q6NUJ1 521 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 PSRC1Q6PGN9 363 aaPredicted RBP22.97■■□□□ 1.27
VPS16-201ENST00000380443 BBS7Q8IWZ6 715 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 PIANPQ8IYJ0 282 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 APCDD1Q8J025 514 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 FBXO39Q8N4B4 442 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 SH3RF2Q8TEC5 729 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 ISG20Q96AZ6 181 aaKnown RBP22.97■■□□□ 1.27
VPS16-201ENST00000380443 PDLIM5Q96HC4 596 aaKnown RBP22.97■■□□□ 1.27
VPS16-201ENST00000380443 APPL1Q9UKG1 709 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 FAM50BQ9Y247 325 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 INSL6Q9Y581 213 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 H3BMM5 538 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 LEFTY2O00292 366 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 UBDO15205 165 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 ACRP10323 421 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 RPS3P23396 243 aaKnown RBP eCLIP22.96■■□□□ 1.27
VPS16-201ENST00000380443 LMAN2Q12907 356 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 TAF11Q15544 211 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 LRRC74BQ6ZQY2 392 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 PGAM4Q8N0Y7 254 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 KCNV2Q8TDN2 545 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 P2RY12Q9H244 342 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 GBF1Q92538 1859 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 A0A0J9YYE9 177 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 A0A1W2PPC1 479 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 UBXN8O00124 270 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 VPS4BO75351 444 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 MT-CO1P00395 513 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 TRBC1P01850 177 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 LINC00271P0C7V0 271 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 NUDT2P50583 147 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 PFKFB4Q16877 469 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 PLEKHG6Q3KR16 790 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 TMEM198Q66K66 360 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 ANKS6Q68DC2 871 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 EFL1Q7Z2Z2 1120 aaKnown RBP22.96■■□□□ 1.27
VPS16-201ENST00000380443 CBARPQ8N350 705 aaPredicted RBP22.96■■□□□ 1.27
VPS16-201ENST00000380443 GIMAP7Q8NHV1 300 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 GRIN3AQ8TCU5 1115 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 TUBGCP5Q96RT8 1024 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 PRO3102Q9H379 93 aa22.96■■□□□ 1.27
VPS16-201ENST00000380443 COLQQ9Y215 455 aaPredicted RBP22.96■■□□□ 1.27
VPS16-201ENST00000380443 SUPT3HB4E1H0 165 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 UBFD1O14562 309 aaKnown RBP22.95■■□□□ 1.26
VPS16-201ENST00000380443 PRMT5O14744 637 aaPredicted RBP22.95■■□□□ 1.26
VPS16-201ENST00000380443 AIM2O14862 343 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 NVLO15381 856 aaKnown RBP22.95■■□□□ 1.26
VPS16-201ENST00000380443 SUPT3HO75486 399 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 SKAP2O75563 359 aaPredicted RBP22.95■■□□□ 1.26
VPS16-201ENST00000380443 CTSL3PQ5NE16 218 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 TAS2R42Q7RTR8 314 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 DSELQ8IZU8 1212 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 KLHL23Q8NBE8 558 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 ZFYVE1Q9HBF4 777 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 MRPL40Q9NQ50 206 aaKnown RBP22.95■■□□□ 1.26
VPS16-201ENST00000380443 PFDN4Q9NQP4 134 aa22.95■■□□□ 1.26
VPS16-201ENST00000380443 E5RI56 91 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 AZIN1O14977 448 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 CDK14O94921 469 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 GLUD1P00367 558 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 ANPEPP15144 967 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 ACADSP16219 412 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 ZNF7P17097 686 aaPredicted RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 SERPINA4P29622 427 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 ACADVLP49748 655 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 LCP2Q13094 533 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 ART3Q13508 389 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 UGT3A2Q3SY77 523 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 LARP4Q71RC2 724 aaKnown RBP eCLIP22.94■■□□□ 1.26
VPS16-201ENST00000380443 LYSMD3Q7Z3D4 306 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 CAMK1DQ8IU85 385 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 TDHQ8IZJ6 230 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 C19orf60Q96EN9 201 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 NAF1Q96HR8 494 aaKnown RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 LYSMD1Q96S90 227 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 BPIFA1Q9NP55 256 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 POMPQ9Y244 141 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 ECI2O75521 394 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 FGBP02675 491 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 CDKN1CP49918 316 aaPredicted RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 EPHA5P54756 1037 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 SNRPD1P62314 119 aaKnown RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 PPM1LQ5SGD2 360 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 BNC2Q6ZN30 1099 aaPredicted RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 OTOP2Q7RTS6 562 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 SNX20Q7Z614 316 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 OR2AP1Q8NGE2 309 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 CD200R1Q8TD46 325 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 DNAJC9Q8WXX5 260 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 FUBP1Q96AE4 644 aaKnown RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 LMLNQ96KR4 655 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 SMIM14Q96QK8 99 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 SLC46A2Q9BY10 475 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 MTIF3Q9H2K0 278 aaKnown RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 S100A14Q9HCY8 104 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 EVLQ9UI08 416 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms