RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 NOL11Q9H8H0 719 aaKnown RBP8.07□□□□□ -1.12
CKAP2-203ENST00000378037 IGSF9Q9P2J2 1179 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 GMPR2Q9P2T1 348 aaKnown RBP8.07□□□□□ -1.12
CKAP2-203ENST00000378037 TMEM98Q9Y2Y6 226 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 CROCCQ5TZA2 2017 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 ZCWPW2A0A1B0GU75 182 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 RGSL1A5PLK6 1076 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 H0Y858 1186 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 CDK14O94921 469 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 GABRB3P28472 473 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 PRDX3P30048 256 aaKnown RBP8.07□□□□□ -1.12
CKAP2-203ENST00000378037 SOAT1P35610 550 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 CCNG1P51959 295 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 GPM6BQ13491 265 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 SERINC3Q13530 473 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 DSC3Q14574 896 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 ITIH4Q14624 930 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 PCLAFQ15004 111 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 ICE2Q659A1 982 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 LSRQ86X29 649 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-203ENST00000378037 PLD3Q8IV08 490 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 FAM20CQ8IXL6 584 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 HJURPQ8NCD3 748 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-203ENST00000378037 ZNF398Q8TD17 642 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 EME1Q96AY2 570 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 MIR1-1HGQ9H1L0 117 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 TDP1Q9NUW8 608 aa8.07□□□□□ -1.12
CKAP2-203ENST00000378037 DUS2Q9NX74 493 aaKnown RBP8.07□□□□□ -1.12
CKAP2-203ENST00000378037 MYOCOSA0A1B0GUC4 107 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 FAM159BA6NKW6 160 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ENO4A6NNW6 628 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ANKRD66B4E2M5 251 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 TPBGLP0DKB5 382 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ETV3P41162 512 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 RGS4P49798 205 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 GTF2H3Q13889 308 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 LRRC66Q68CR7 880 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 CNKSR3Q6P9H4 555 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 SUSD1Q6UWL2 747 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 IZUMO2Q6UXV1 221 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 CHST15Q7LFX5 561 aaPredicted RBP8.06□□□□□ -1.12
CKAP2-203ENST00000378037 MRPL10Q7Z7H8 261 aaKnown RBP8.06□□□□□ -1.12
CKAP2-203ENST00000378037 LMNTD2Q8IXW0 634 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 SUSD6Q92537 303 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 CENPIQ92674 756 aaPredicted RBP8.06□□□□□ -1.12
CKAP2-203ENST00000378037 SLC9A7Q96T83 725 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 FEM1AQ9BSK4 669 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 CCDC90BQ9GZT6 254 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 RHBGQ9H310 441 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ATP13A3Q9H7F0 1226 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 DLGAP2Q9P1A6 1054 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 KLHL3Q9UH77 587 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 MID2Q9UJV3 735 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 HMX2A2RU54 273 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ZNF839A8K0R7 811 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ELFN1P0C7U0 828 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 MSH3P20585 1137 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 PTPN4P29074 926 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 NFYCQ13952 458 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ANKS6Q68DC2 871 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 MSANTD2Q6P1R3 559 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 POTEHQ6S545 545 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 CCNJLQ8IV13 435 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 C10orf82Q8WW14 230 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 FIG4Q92562 907 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 OLFM3Q96PB7 478 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 BTBD10Q9BSF8 475 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 CADM1Q9BY67 442 aaKnown RBP8.06□□□□□ -1.12
CKAP2-203ENST00000378037 ELOVL6Q9H5J4 265 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 PCDH12Q9NPG4 1184 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 IMP3Q9NV31 184 aaKnown RBP8.06□□□□□ -1.12
CKAP2-203ENST00000378037 LGALS13Q9UHV8 139 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 TAGLN3Q9UI15 199 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 STARD13Q9Y3M8 1113 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 SNX8Q9Y5X2 465 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 UNC13CQ8NB66 2214 aa8.06□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3DA0A087WVF3 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3IA0A087WXS9 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3EA0A087X179 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3KA0A087X1G2 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3FA6NER0 549 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3LB9A6J9 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SMAPO00193 183 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 MMP20O60882 483 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CLASP2O75122 1294 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 LUC7L3O95232 432 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PAK4O96013 591 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PCCBP05166 539 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 EIF2S1P05198 315 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3HP0C7X1 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CRHR1P34998 444 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 DGKQP52824 942 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 DSC1Q08554 894 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PCBP2Q15366 365 aaKnown RBP eCLIP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 ZIK1Q3SY52 487 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3GQ6DHY5 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3CQ6IPX1 549 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 FRMD7Q6ZUT3 714 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PIGWQ7Z7B1 504 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms