RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SLC22A9Q8IVM8 553 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 CCDC126Q96EE4 140 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 DCUN1D1Q96GG9 259 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 KLHL4Q9C0H6 718 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 ATG10Q9H0Y0 220 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 HCFC1R1Q9NWW0 138 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 STX18Q9P2W9 335 aaKnown RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 SBF1O95248 1867 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 A0A0J9YYE9 177 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 PRAMEF11O60813 436 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 NNMTP40261 264 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 MAPK10P53779 464 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 MBOAT1Q6ZNC8 495 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 SZRD1Q7Z422 152 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 BBS7Q8IWZ6 715 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 TRIML2Q8N7C3 387 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 CYB5D2Q8WUJ1 264 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 PPP1R2P1Q96PQ5 205 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 CIB1Q99828 191 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 C2orf49Q9BVC5 232 aaPredicted RBP13.13□□□□□ -0.31
NCDN-203ENST00000373253 SPATA16Q9BXB7 569 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 NOL11Q9H8H0 719 aaKnown RBP13.13□□□□□ -0.31
NCDN-203ENST00000373253 ZFYVE1Q9HBF4 777 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 S100A14Q9HCY8 104 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 DNAJC28Q9NX36 388 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.13□□□□□ -0.31
NCDN-203ENST00000373253 SLC7A4O43246 635 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 C8AP07357 584 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 ACTR3P61158 418 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 SULT2A1Q06520 285 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 KDELC1Q6UW63 502 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 PCYOX1LQ8NBM8 494 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 VPS50Q96JG6 964 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 BOCQ9BWV1 1114 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 TNFRSF12AQ9NP84 129 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 NDUFAF1Q9Y375 327 aa13.13□□□□□ -0.31
NCDN-203ENST00000373253 E7ENX8 843 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 GSNP06396 782 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 SNRPB2P08579 225 aaKnown RBP13.12□□□□□ -0.31
NCDN-203ENST00000373253 ATP6V1C1P21283 382 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 ARCN1P48444 511 aaKnown RBP13.12□□□□□ -0.31
NCDN-203ENST00000373253 CCNG1P51959 295 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 CDH4P55283 916 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 CLCQ05315 142 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 GRB7Q14451 532 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 OR4D1Q15615 310 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 OR10Q1Q8NGQ4 319 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 NMD3Q96D46 503 aaKnown RBP13.12□□□□□ -0.31
NCDN-203ENST00000373253 MED8Q96G25 268 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 EFHD1Q9BUP0 239 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 MAGEH1Q9H213 219 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 AKTIPQ9H8T0 292 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 GRID2O43424 1007 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 PRAMEF12O95522 483 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 RPL34P49207 117 aaKnown RBP13.12□□□□□ -0.31
NCDN-203ENST00000373253 RGS4P49798 205 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 NTHL1P78549 312 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 HMGCS1Q01581 520 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 TRAF2Q12933 501 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 SPPL2CQ8IUH8 684 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 MYO1HQ8N1T3 1032 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 CLSTN3Q9BQT9 956 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 C17orf80Q9BSJ5 609 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 ARL15Q9NXU5 204 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 VPS51Q9UID3 782 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 DOCK6Q96HP0 2047 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 SLCO1B7G3V0H7 640 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 TEX28O15482 410 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 H2AFYO75367 372 aaKnown RBP13.12□□□□□ -0.31
NCDN-203ENST00000373253 ECI2O75521 394 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 ITPKAP23677 461 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 WASP42768 502 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 C6orf52Q5T4I8 152 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 ZNF648Q5T619 568 aaPredicted RBP13.12□□□□□ -0.31
NCDN-203ENST00000373253 TLDC1Q6P9B6 456 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 SERPINA9Q86WD7 417 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 LRRC49Q8IUZ0 686 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 ARRDC2Q8TBH0 407 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 LPGAT1Q92604 370 aa13.12□□□□□ -0.31
NCDN-203ENST00000373253 PRPF18Q99633 342 aaKnown RBP13.12□□□□□ -0.31
NCDN-203ENST00000373253 LDB2O43679 373 aa13.11□□□□□ -0.31
NCDN-203ENST00000373253 SEC22BO75396 215 aa13.11□□□□□ -0.31
NCDN-203ENST00000373253 HIST1H2AGP0C0S8 130 aaPredicted RBP13.11□□□□□ -0.31
NCDN-203ENST00000373253 CKMT2P17540 419 aa13.11□□□□□ -0.31
NCDN-203ENST00000373253 HIST1H2ADP20671 130 aa13.11□□□□□ -0.31
NCDN-203ENST00000373253 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
NCDN-203ENST00000373253 SLC44A4Q53GD3 710 aa13.11□□□□□ -0.31
NCDN-203ENST00000373253 ST13P4Q8IZP2 240 aaPredicted RBP13.11□□□□□ -0.31
NCDN-203ENST00000373253 CLYBLQ8N0X4 340 aa13.11□□□□□ -0.31
NCDN-203ENST00000373253 HIST1H2AHQ96KK5 128 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms