RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 PDX1P52945 283 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 MSLNQ13421 630 aaPredicted RBP20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 SLC1A5Q15758 541 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 ISXQ2M1V0 245 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 SOWAHCQ53LP3 525 aaPredicted RBP20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 RANBP10Q6VN20 620 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 CDKL3Q8IVW4 592 aaPredicted RBP20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 UBL4BQ8N7F7 174 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 CCDC112Q8NEF3 446 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 WDR48Q8TAF3 677 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 DTX3LQ8TDB6 740 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 CCDC74AQ96AQ1 378 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 NXPE2Q96DL1 559 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 FAM118BQ9BPY3 351 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 GSDMCQ9BYG8 508 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 TRABDQ9H4I3 376 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 TAAR2Q9P1P5 351 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 MOSPD1Q9UJG1 213 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 PLEKHM1Q9Y4G2 1056 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 GCN1Q92616 2671 aaKnown RBP20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 NBEAQ8NFP9 2946 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 ZNF106Q9H2Y7 1883 aaKnown RBP20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 A0A1W2PNU3 283 aaPredicted RBP20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 INPP4BO15327 924 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 CSO75390 466 aaKnown RBP20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 HLA-DPA1P20036 260 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 AK4P27144 223 aaPredicted RBP20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 CETN2P41208 172 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 ILF3Q12906 894 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 C14orf28Q4W4Y0 310 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 ANKRD20A2Q5SQ80 823 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 ANKRD20A1Q5TYW2 823 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 ANKRD20A3Q5VUR7 823 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 PDPK2PQ6A1A2 396 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 ZNF438Q7Z4V0 828 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 LRRC8AQ8IWT6 810 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 TRAM1L1Q8N609 369 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 SLC35B2Q8TB61 432 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 GRAMD1AQ96CP6 724 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 SPATA13Q96N96 652 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 DEPDC7Q96QD5 511 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 OR2M4Q96R27 311 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 TSGA10Q9BZW7 698 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 ABCG4Q9H172 646 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 RAD18Q9NS91 495 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 RSPH14Q9UHP6 348 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 TMPRSS11EQ9UL52 423 aa20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 R3HDM2Q9Y2K5 976 aaKnown RBP20.37■□□□□ 0.85
SMNDC1-201ENST00000369592 A0A1W2PQM1 296 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 TCRBV7S2A1N4TA0A589 114 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 NUDT21O43809 227 aaKnown RBP20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 ATP1A1P05023 1023 aaKnown RBP20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 GLB1P16278 677 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 CCZ1BP86790 482 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 CCZ1P86791 482 aaPredicted RBP20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 NR1D2Q14995 579 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 CCDC181Q5TID7 509 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 CCDC70Q6NSX1 233 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 DOK6Q6PKX4 331 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 C19orf48Q6RUI8 117 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 PLEKHG4BQ96PX9 1271 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 ZSCAN5AQ9BUG6 496 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 GPR63Q9BZJ6 419 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 RMI1Q9H9A7 625 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 IL17CQ9P0M4 197 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 ENTPD2Q9Y5L3 495 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 RNF215Q9Y6U7 377 aa20.36■□□□□ 0.85
SMNDC1-201ENST00000369592 LOC400499M0QZD8 3231 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 C5orf60A6NFR6 353 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 F5H423 210 aaPredicted RBP20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 ANXA9O76027 345 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 GEMP55040 296 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 LRP8Q14114 963 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 ITPRIPL1Q6GPH6 555 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 DARS2Q6PI48 645 aaKnown RBP20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 RBM44Q6ZP01 1051 aaKnown RBP20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 PDZD3Q86UT5 571 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 NAGSQ8N159 534 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 TTC13Q8NBP0 860 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 IPMKQ8NFU5 416 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 DPEP2Q9H4A9 486 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 HACD3Q9P035 362 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 GUCA1BQ9UMX6 200 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 ITPR1Q14643 2758 aa20.35■□□□□ 0.85
SMNDC1-201ENST00000369592 SMG1Q96Q15 3661 aaKnown RBP20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 B4DGG1 531 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 CHUKO15111 745 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 KCNN4O15554 427 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 KRT86O43790 486 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 NUAK1O60285 661 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 ZNF189O75820 626 aaPredicted RBP20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 DXOO77932 396 aaKnown RBP20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 AGTP01019 485 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 PSMB4P28070 264 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 CCL7P80098 99 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 B4GALNT1Q00973 533 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 ALS2CLQ60I27 953 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 DENND5AQ6IQ26 1287 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 SLC25A41Q8N5S1 370 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 CCDC110Q8TBZ0 833 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms