RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 ZFAND2BQ8WV99 257 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 DNMT3LQ9UJW3 386 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 CCDC160A6NGH7 325 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 KERAO60938 352 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 NIPSNAP2O75323 286 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 TNFAIP8O95379 198 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 KLKB1P03952 638 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 RPL5P46777 297 aaKnown RBP18■□□□□ 0.47
UBQLN4-201ENST00000368309 ATP4BP51164 291 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 RAD51Q06609 339 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 LCP2Q13094 533 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 SLC5A9Q2M3M2 681 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 UGT3A1Q6NUS8 523 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 SPPL2CQ8IUH8 684 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 SIDT2Q8NBJ9 832 aaKnown RBP18■□□□□ 0.47
UBQLN4-201ENST00000368309 TOP1MTQ969P6 601 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 VPS33AQ96AX1 596 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 SPATA17Q96L03 361 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 PRICKLE1Q96MT3 831 aaPredicted RBP18■□□□□ 0.47
UBQLN4-201ENST00000368309 ASB2Q96Q27 587 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 ACOX2Q99424 681 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 SH3GL3Q99963 347 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 SARS2Q9NP81 518 aaKnown RBP18■□□□□ 0.47
UBQLN4-201ENST00000368309 SCUBE2Q9NQ36 999 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 CNOT6Q9ULM6 557 aaKnown RBP18■□□□□ 0.47
UBQLN4-201ENST00000368309 ABT1Q9ULW3 272 aaKnown RBP18■□□□□ 0.47
UBQLN4-201ENST00000368309 GREB1Q4ZG55 1949 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 AKAP10O43572 662 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 HOXB8P17481 243 aaPredicted RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 LBPP18428 481 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 BTG3Q14201 252 aaPredicted RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 NADK2Q4G0N4 442 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 ANKS6Q68DC2 871 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 RBM44Q6ZP01 1051 aaKnown RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 FUBP1Q96AE4 644 aaKnown RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 PBXIP1Q96AQ6 731 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 TEX37Q96LM6 180 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF599Q96NL3 588 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 CASD1Q96PB1 797 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 INTS10Q9NVR2 710 aaKnown RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 FKBPLQ9UIM3 349 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 NDUFAF1Q9Y375 327 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 H3BNC9 293 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 TPST1O60507 370 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 IRF1P10914 325 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 PSMC3P17980 439 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 CES1P23141 567 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 IFNEQ86WN2 208 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 SLC15A3Q8IY34 581 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 RPL10LQ96L21 214 aaKnown RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 DERL2Q9GZP9 239 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 POPDC3Q9HBV1 291 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 LCHNA4D1U4 455 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 C2orf81A6NN90 581 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 STAMBPO95630 424 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 HSPA8P11142 646 aaKnown RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 UGT1A6P19224 532 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 SLC11A2P49281 568 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 DIS3LQ8TF46 1054 aaKnown RBP17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 ROPN1LQ96C74 230 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 BIRC8Q96P09 236 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 PLXNA3P51805 1871 aa17.99■□□□□ 0.47
UBQLN4-201ENST00000368309 IQCF5A8MTL0 148 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 HSPA13P48723 471 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 ALG1LQ6GMV1 187 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 AFTPHQ6ULP2 937 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 HACD2Q6Y1H2 254 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 AHI1Q8N157 1196 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 GPATCH1Q9BRR8 931 aaKnown RBP17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 AGO1Q9UL18 857 aaKnown RBP17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 ASB1Q9Y576 335 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 RAI2Q9Y5P3 530 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 FAM149AA5PLN7 773 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 TM4SF4P48230 202 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 KPNA1P52294 538 aaPredicted RBP17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 TAF1AQ15573 450 aaPredicted RBP17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 ZRANB3Q5FWF4 1079 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 OR2T34Q8NGX1 318 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 OR2T3Q8NH03 318 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 DNAJB14Q8TBM8 379 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 EEF1AKMT1Q8WVE0 214 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 SDR39U1Q9NRG7 319 aaPredicted RBP17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 CMTM6Q9NX76 183 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF225Q9UK10 706 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 RNF11Q9Y3C5 154 aa17.98■□□□□ 0.47
UBQLN4-201ENST00000368309 SMIM31A0A1B0GVY4 71 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 KDELR3O43731 214 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 NBNO60934 754 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 RHOCP08134 193 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 MC4RP32245 332 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 CASP2P42575 452 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 CDH4P55283 916 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 ZBTB49Q6ZSB9 765 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 BCL7CQ8WUZ0 217 aaPredicted RBP17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 NCSTNQ92542 709 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 EFHD1Q9BUP0 239 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 TDRD1Q9BXT4 1180 aaKnown RBP17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 FXYD1O00168 92 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 SYVN1Q86TM6 617 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms