RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 MEIS2O14770 477 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PRPF4O43172 522 aaKnown RBP eCLIP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ASNA1O43681 348 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 GPRIN2O60269 458 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 LRP3O75074 770 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 RECQL5O94762 991 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 EFEMP2O95967 443 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 OTCP00480 354 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 MPOP05164 745 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TUBBP07437 444 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 DBHP09172 617 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 FCER1AP12319 257 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 EDNRBP24530 442 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PTBP1P26599 531 aaKnown RBP eCLIP3.54□□□□□ -1.845e-10■■■■□ 20.2
ECHDC1-205ENST00000368295 EPHA8P29322 1005 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PRDX5P30044 214 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TTKP33981 857 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 GRK3P35626 688 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PGM1P36871 562 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 KHKP50053 298 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 CLCN4P51793 760 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PNLIPRP1P54315 467 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TPM4P67936 248 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TUBB4BP68371 445 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 NKX6-1P78426 367 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ATP8B2P98198 1209 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 MYO1EQ12965 1108 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 IL24Q13007 206 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 BYSLQ13895 437 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 GAMTQ14353 236 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 NR1I3Q14994 352 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ARHGAP19Q14CB8 494 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 RPS6KA2Q15349 733 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 DGKDQ16760 1214 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PRICKLE4Q2TBC4 344 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 HFEQ30201 348 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ANKRD20A4Q4UJ75 823 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ANKRD20A8PQ5CZ79 823 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ZRANB3Q5FWF4 1079 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 RAB41Q5JT25 222 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ANKRD20A2Q5SQ80 823 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ADGRF1Q5T601 910 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM69AQ5T7M9 428 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 MROH9Q5TGP6 573 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ANKRD20A1Q5TYW2 823 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ANKRD20A3Q5VUR7 823 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ARHGAP36Q6ZRI8 547 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ERN2Q76MJ5 926 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PLPPR4Q7Z2D5 763 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 STK32CQ86UX6 486 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 DCP2Q8IU60 420 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 LPCAT1Q8NF37 534 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 HUS1BQ8NHY5 278 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 METTL6Q8TCB7 284 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF384Q8TF68 577 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 RSC1A1Q92681 617 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PEX13Q92968 403 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 FBXW5Q969U6 566 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 NMD3Q96D46 503 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PHF21BQ96EK2 531 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 SNX22Q96L94 193 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 GCNAQ96QF7 691 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PSKH2Q96QS6 385 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ELF4Q99607 663 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 MTG1Q9BT17 334 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PNNQ9H307 717 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 FZD8Q9H461 694 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 EPB41L1Q9H4G0 881 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TFB2MQ9H5Q4 396 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 AZI2Q9H6S1 392 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 DCTPP1Q9H773 170 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ARMT1Q9H993 441 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 AGPAT5Q9NUQ2 364 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 POLR3BQ9NW08 1133 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 FKBP14Q9NWM8 211 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TRNAU1APQ9NX07 287 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 CPNE7Q9UBL6 633 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 DDX25Q9UHL0 483 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 DERAQ9Y315 318 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 CBY1Q9Y3M2 126 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TRPV2Q9Y5S1 764 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 PMF1-BGLAPU3KQ54 211 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 X6R8D5 127 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ZMYM2Q9UBW7 1377 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 OTOGQ6ZRI0 2925 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 BOD1L1Q8NFC6 3051 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ATAD5Q96QE3 1844 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ADGRG4Q8IZF6 3080 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ICE1Q9Y2F5 2266 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TRIP12Q14669 1992 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TARM1B6A8C7 271 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM47E-STBD1D6RA91 191 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 C5orf67F2Z3F1 127 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 K7ERQ8 282 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 HRKO00198 91 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TSPAN4O14817 238 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 HNRNPRO43390 633 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 VEGFDO43915 354 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 GUCY1B2O75343 617 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TACC1O75410 805 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms