RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ATP13A4Q4VNC1 1196 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 PABPC1LQ4VXU2 614 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 C6orf163Q5TEZ5 329 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 ARHGAP17Q68EM7 881 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 NAIF1Q69YI7 327 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 CGB2Q6NT52 195 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 EFCAB12Q6NXP0 572 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 DARS2Q6PI48 645 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 PRSS55Q6UWB4 352 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 NLRP9Q7RTR0 991 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 OTOAQ7RTW8 1153 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 GLRX5Q86SX6 157 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 LCA5Q86VQ0 697 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 TMPRSS6Q8IU80 811 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 LMNTD2Q8IXW0 634 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 COLGALT2Q8IYK4 626 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 RCBTB1Q8NDN9 531 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 TCP10LQ8TDR4 215 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 AGAP11Q8TF27 550 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 TFAP2BQ92481 460 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 CDKL2Q92772 493 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 ATP2A3Q93084 1043 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 TTC17Q96AE7 1141 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 HPDLQ96IR7 371 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 HSFY1Q96LI6 401 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 RMDN2Q96LZ7 410 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 ACAP3Q96P50 834 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 PAIP2Q9BPZ3 127 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 BTBD10Q9BSF8 475 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 CCDC28BQ9BUN5 200 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 INO80BQ9C086 356 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 BRD8Q9H0E9 1235 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 MYLK2Q9H1R3 596 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 CDT1Q9H211 546 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 ZNF768Q9H5H4 540 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 FNIP2Q9P278 1114 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 HESX1Q9UBX0 185 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 DPP7Q9UHL4 492 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 TMEFF2Q9UIK5 374 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 CHKBQ9Y259 395 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 MAN2B2Q9Y2E5 1009 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 PRG3Q9Y2Y8 225 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 VWA8A3KMH1 1905 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 HIVEP3Q5T1R4 2406 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 PDCD11Q14690 1871 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 TNRC6BQ9UPQ9 1833 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 CCDC168Q8NDH2 2452 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 TCRBV9S1A1TA0A576 114 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 WDR27A2RRH5 827 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 VGLL3A8MV65 326 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 H7BY64 318 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 M0QYV0 167 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 COPEO14579 308 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 PLD2O14939 933 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 HAUS5O94927 633 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 ZBED1O96006 694 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 C8AP07357 584 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 RHOP08100 348 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 KRT19P08727 400 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 KRT16P08779 473 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 POU2F2P09086 479 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 HNRNPA1P09651 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 ATXN1LP0C7T5 689 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 ZSCAN5DPP0CG00 497 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 NEFHP12036 1026 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 MYF5P13349 255 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 CCDC130P13994 396 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 PDGFRAP16234 1089 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 PSMC3P17980 439 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 CALRP27797 417 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 SSTR1P30872 391 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 HOXA9P31269 272 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 CRHR1P34998 444 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 GJC1P36383 396 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 HADHAP40939 763 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 TNFSF9P41273 254 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 MAGEA3P43357 314 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 PRKAA2P54646 552 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 CDH6P55285 790 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 SH3BGRP55822 239 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 GPR85P60893 370 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 BASP1P80723 227 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 MRPS35P82673 323 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 NFKB2Q00653 900 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 MGAT5Q09328 741 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 WASHC5Q12768 1159 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 TCEA2Q15560 299 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 SLC1A5Q15758 541 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 ZKSCAN8Q15776 578 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 DPYSL2Q16555 572 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 DNAL1Q4LDG9 190 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 TAF1BQ53T94 588 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 FAM102AQ5T9C2 384 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 DENND5AQ6IQ26 1287 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 FSTL4Q6MZW2 842 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 SH2D5Q6ZV89 423 aa6.53□□□□□ -1.36
ECHDC1-202ENST00000368289 PDZD4Q76G19 769 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms