RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 MUC13Q9H3R2 512 aa13.08□□□□□ -0.32
NCSTN-202ENST00000368063 ATPIF1Q9UII2 106 aa13.08□□□□□ -0.32
NCSTN-202ENST00000368063 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
NCSTN-202ENST00000368063 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
NCSTN-202ENST00000368063 F5H423 210 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 H3BQ06 376 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 NCK1P16333 377 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TGFBR2P37173 567 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 GLRBP48167 497 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 MASP1P48740 699 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 ATP4BP51164 291 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TPD52P55327 224 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SRP54P61011 504 aaKnown RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 FADDQ13158 208 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 CLCA4Q14CN2 919 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 EML3Q32P44 896 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 BCL7AQ4VC05 210 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SLC51AQ86UW1 340 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 RIMKLAQ8IXN7 391 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 CCNYL1Q8N7R7 359 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 LINC00469Q8N7U9 141 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TMBIM1Q969X1 311 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 UQCC2Q9BRT2 126 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 C6orf62Q9GZU0 229 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 KAT8Q9H7Z6 458 aaKnown RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 RANGRFQ9HD47 186 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TNFRSF12AQ9NP84 129 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 KMT5AQ9NQR1 393 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 GTSE1Q9NYZ3 720 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 GABBR1Q9UBS5 961 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 A3GALT2U3KPV4 340 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 LRIG2O94898 1065 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 PRLP01236 227 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 YWHABP31946 246 aaKnown RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TRAF3Q13114 568 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 DMP1Q13316 513 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 FRG1Q14331 258 aaKnown RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 LRRC26Q2I0M4 334 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SPANXN3Q5MJ09 141 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 CLEC4FQ8N1N0 589 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■■■■ 54.9
NCSTN-202ENST00000368063 RIT2Q99578 217 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SDHCQ99643 169 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.07□□□□□ -0.326e-9■□□□□ 9.7
NCSTN-202ENST00000368063 DPEP3Q9H4B8 488 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 STAP1Q9ULZ2 295 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 FIS1Q9Y3D6 152 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 PCDHA9Q9Y5H5 950 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 H3BMM5 538 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 NDUFA2O43678 99 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 XPNPEP2O43895 674 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 IFI30P13284 250 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 GPX3P22352 226 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SPP2Q13103 211 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 CA9Q16790 459 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 UGT3A2Q3SY77 523 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 EID3Q8N140 333 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 FSTL5Q8N475 847 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 GLB1L3Q8NCI6 653 aaPredicted RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 PJA1Q8NG27 643 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 MCOLN3Q8TDD5 553 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 PPP1R13LQ8WUF5 828 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SLC7A6Q92536 515 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 NEDD4LQ96PU5 975 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SEPHS2Q99611 448 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 TRIM8Q9BZR9 551 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 DDX4Q9NQI0 724 aaKnown RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 EHD3Q9NZN3 535 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 ERVK-18Q9QC07 812 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 SCAF8Q9UPN6 1271 aaKnown RBP13.07□□□□□ -0.32
NCSTN-202ENST00000368063 ANKRD6Q9Y2G4 727 aa13.07□□□□□ -0.32
NCSTN-202ENST00000368063 EFCAB9A8MZ26 197 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 CNTN5O94779 1100 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 LYPLA2O95372 231 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 POLBP06746 335 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 COL6A1P12109 1028 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 UGT2B10P36537 528 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 GSK3BP49841 420 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 GTF2A2P52657 109 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 DGCR6Q14129 220 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 PSMD5Q16401 504 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 SHEQ5VZ18 495 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 NRARPQ7Z6K4 114 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 OR4M2Q8NGB6 313 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 OR10Z1Q8NGY1 313 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 REXO5Q96IC2 774 aaKnown RBP13.06□□□□□ -0.32
NCSTN-202ENST00000368063 SCYL1Q96KG9 808 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
NCSTN-202ENST00000368063 ZBTB20Q9HC78 741 aaPredicted RBP13.06□□□□□ -0.32
NCSTN-202ENST00000368063 COQ3Q9NZJ6 369 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms