RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 C11orf49Q9H6J7 331 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 RPF2Q9H7B2 306 aaKnown RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 ZNF395Q9H8N7 513 aaPredicted RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 REV3LO60673 3130 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 ALDOAP04075 364 aaKnown RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 RAD52P43351 418 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 ALDH1A3P47895 512 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 ST13P50502 369 aaKnown RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 CLCN4P51793 760 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 NDST2P52849 883 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 RACK1P63244 317 aaKnown RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 IFRD2Q12894 506 aaPredicted RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 DPYSL2Q16555 572 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 GNASQ5JWF2 1037 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 BNIPLQ7Z465 357 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 TMEM192Q8IY95 271 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 ZSCAN1Q8NBB4 408 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 SHKBP1Q8TBC3 707 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 HEXIM2Q96MH2 286 aaKnown RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 TMEM79Q9BSE2 394 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 WACQ9BTA9 647 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 BTBD2Q9BX70 525 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 DPEP3Q9H4B8 488 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 NOL6Q9H6R4 1146 aaKnown RBP10.8□□□□□ -0.68
SND1-201ENST00000354725 TRIM39Q9HCM9 518 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 DNAJC28Q9NX36 388 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 SEPT3Q9UH03 358 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 GMEB2Q9UKD1 530 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 ITGA11Q9UKX5 1188 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 NUP50Q9UKX7 468 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
SND1-201ENST00000354725 MYLKQ15746 1914 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 MLNP12872 115 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 TGM1P22735 817 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 GNL1P36915 607 aaPredicted RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 SERPINB9P50453 376 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 FRG1Q14331 258 aaKnown RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 TRMT10BQ6PF06 316 aaKnown RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 CXCL17Q6UXB2 119 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 FAM183BPQ6ZVS7 135 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 GALNT11Q8NCW6 608 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 TRMT2BQ96GJ1 504 aaKnown RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 QKIQ96PU8 341 aaKnown RBP eCLIP10.79□□□□□ -0.687e-7■■■■□ 19.8
SND1-201ENST00000354725 EBF4Q9BQW3 602 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 ZPBPQ9BS86 351 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 AP5M1Q9H0R1 490 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 CDT1Q9H211 546 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 C12orf49Q9H741 205 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 NRBP2Q9NSY0 501 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 TAS2R7Q9NYW3 318 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 CDC14AQ9UNH5 594 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 UGT2A1Q9Y4X1 527 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 PCDHGA10Q9Y5H3 936 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 ST14Q9Y5Y6 855 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 C1orf232A0A0U1RR37 186 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 ZNF839A8K0R7 811 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 PRR5-ARHGAP8B1AHC4 643 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 BET1O15155 118 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 AKAP10O43572 662 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 METTL18O95568 372 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 RBL1P28749 1068 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 HARS2P49590 506 aaKnown RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 ARFIP1P53367 373 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 RPP38P78345 283 aaKnown RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 ARHGAP8P85298 464 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 C17orf67Q0P5P2 114 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 SLC10A2Q12908 348 aaPredicted RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 PCLAFQ15004 111 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 CHI3L2Q15782 390 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 PLA2G4EQ3MJ16 856 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 ZBED5Q49AG3 693 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 FGD3Q5JSP0 725 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 EFHC1Q5JVL4 640 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 SCARA5Q6ZMJ2 495 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 MPP5Q8N3R9 675 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 WNT8BQ93098 351 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 TOX2Q96NM4 488 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 RAB6BQ9NRW1 208 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 CPNE7Q9UBL6 633 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 ARVCFO00192 962 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 GIPC1O14908 333 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 NFICP08651 508 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 GABRB3P28472 473 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 PSEN2P49810 448 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 STAT5BP51692 787 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 AQP5P55064 265 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 CDH8P55286 799 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 ESRRGP62508 458 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 MTM1Q13496 603 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 NAB1Q13506 487 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 CCNIQ14094 377 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 MFSD10Q14728 455 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 GPNMBQ14956 572 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 GALNT18Q6P9A2 607 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 OR5H6Q8NGV6 325 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 ADAM19Q9H013 955 aa10.79□□□□□ -0.68
SND1-201ENST00000354725 EIF2B3Q9NR50 452 aaKnown RBP10.79□□□□□ -0.68
SND1-201ENST00000354725 COL1A2P08123 1366 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms