RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CAPN3P20807 821 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 LPOP22079 712 aaPredicted RBP22■■□□□ 1.11
UPF3A-201ENST00000351487 POLE2P56282 527 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 SLC8B1Q6J4K2 584 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 NPAS4Q8IUM7 802 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 FBXO22Q8NEZ5 403 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 EME1Q96AY2 570 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 ZNF512Q96ME7 567 aaPredicted RBP22■■□□□ 1.11
UPF3A-201ENST00000351487 SLC39A3Q9BRY0 314 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 SLC2A11Q9BYW1 496 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 NDUFA13Q9P0J0 144 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 ABT1Q9ULW3 272 aaKnown RBP22■■□□□ 1.11
UPF3A-201ENST00000351487 A0A1B0GVM2 712 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 ARVCFO00192 962 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 COCHO43405 550 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 TNFAIP8O95379 198 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 KLKB1P03952 638 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 PRR35P0CG20 571 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 IDO1P14902 403 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 GSTT1P30711 240 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 USP41Q3LFD5 358 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 HECTD3Q5T447 861 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 CWF19L1Q69YN2 538 aaKnown RBP22■■□□□ 1.11
UPF3A-201ENST00000351487 DHFR2Q86XF0 187 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 HERC6Q8IVU3 1022 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 CRIPAKQ8N1N5 446 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 GALNT4Q8N4A0 578 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 MINDY1Q8N5J2 469 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 BCL7CQ8WUZ0 217 aaPredicted RBP22■■□□□ 1.11
UPF3A-201ENST00000351487 TUBGCP3Q96CW5 907 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 ZNF597Q96LX8 424 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 EFHD1Q9BUP0 239 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 NUSAP1Q9BXS6 441 aaKnown RBP22■■□□□ 1.11
UPF3A-201ENST00000351487 GIMAP2Q9UG22 337 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 LRFN2Q9ULH4 789 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 TET1Q8NFU7 2136 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 A0A1B0GTL3 188 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 HOXA2O43364 376 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 HGFP14210 728 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 SGSHP51688 502 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 PTPRNQ16849 979 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 MAP7D1Q3KQU3 841 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 C6orf52Q5T4I8 152 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 TXNDC11Q6PKC3 985 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 LPCAT1Q8NF37 534 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 LRTOMTQ8WZ04 291 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 CNBD2Q96M20 576 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 ZBED2Q9BTP6 218 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 SLC4A7Q9Y6M7 1214 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.99■■□□□ 1.11
UPF3A-201ENST00000351487 FXYD1O00168 92 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 CDC7O00311 574 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 ADAM12O43184 909 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 STC2O76061 302 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 TSPAN12O95859 305 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 PKMP14618 531 aaKnown RBP21.99■■□□□ 1.11
UPF3A-201ENST00000351487 TUFMP49411 452 aaKnown RBP21.99■■□□□ 1.11
UPF3A-201ENST00000351487 TTPAP49638 278 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 MYBPC1Q00872 1141 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 ZNF177Q13360 481 aaPredicted RBP21.99■■□□□ 1.11
UPF3A-201ENST00000351487 PABPC1LQ4VXU2 614 aaKnown RBP21.99■■□□□ 1.11
UPF3A-201ENST00000351487 OR2T34Q8NGX1 318 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 OR2T3Q8NH03 318 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 TSPEARQ8WU66 669 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.99■■□□□ 1.11
UPF3A-201ENST00000351487 ZUFSPQ96AP4 578 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 SEMA4BQ9NPR2 832 aaPredicted RBP21.99■■□□□ 1.11
UPF3A-201ENST00000351487 MTRRQ9UBK8 725 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 PCDHGB4Q9UN71 923 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 PCDHGB5Q9Y5G0 923 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 RAI2Q9Y5P3 530 aa21.99■■□□□ 1.11
UPF3A-201ENST00000351487 NME4O00746 187 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 ANGPT2O15123 496 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 VPS26AO75436 327 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 STAMBPO95630 424 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 LINC00032P0C843 101 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 CORO1AP31146 461 aaKnown RBP21.98■■□□□ 1.11
UPF3A-201ENST00000351487 CDKN1CP49918 316 aaPredicted RBP21.98■■□□□ 1.11
UPF3A-201ENST00000351487 FOXM1Q08050 763 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 PSAPL1Q6NUJ1 521 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 CYP2R1Q6VVX0 501 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 EFL1Q7Z2Z2 1120 aaKnown RBP21.98■■□□□ 1.11
UPF3A-201ENST00000351487 PIANPQ8IYJ0 282 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 TRIM4Q9C037 500 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 SLC52A3Q9NQ40 469 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 ARMC1Q9NVT9 282 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 CNOT6Q9ULM6 557 aaKnown RBP21.98■■□□□ 1.11
UPF3A-201ENST00000351487 TMCO1Q9UM00 188 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 BTRCQ9Y297 605 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 NPEPPSL1A6NEC2 478 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 ANKRD66B4E2M5 251 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 H7C0S8 307 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 CBX4O00257 560 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 PFDN6O15212 129 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 HSD17B1P14061 328 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 CLCN4P51793 760 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 GRIK2Q13002 908 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 IKBKEQ14164 716 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 SPATS1Q496A3 300 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 VPS26BQ4G0F5 336 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms