RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TP63Q9H3D4 680 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 DNMT3LQ9UJW3 386 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 CD2P06729 351 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 COX4I1P13073 169 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 NEK3P51956 506 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 KIAA1324Q6UXG2 1013 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MCOLN3Q8TDD5 553 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 DEFB118Q96PH6 123 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 NMRAL1Q9HBL8 299 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ANKHQ9HCJ1 492 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF334Q9HCZ1 680 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 FBXO6Q9NRD1 293 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MAT2BQ9NZL9 334 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 APOC4-APOC2K7ER74 178 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 TPP1O14773 563 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 PIAS1O75925 651 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 APOC2P02655 101 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ITGB5P18084 799 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 PTPN3P26045 913 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 VARSP26640 1264 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 PIK3CBP42338 1070 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 STT3AP46977 705 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 NKX2-5P52952 324 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 GTF2BQ00403 316 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MAB21L1Q13394 359 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 CRY1Q16526 586 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 C21orf62-AS1Q17RA5 79 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 INSCQ1MX18 579 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF613Q6PF04 617 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 USP45Q70EL2 814 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 PIGZQ86VD9 579 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MARK4Q96L34 752 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 POLG2Q9UHN1 485 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 EPHB6O15197 1021 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 YKT6O15498 198 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 SNAPC5O75971 98 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 SERPINA4P29622 427 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 HOXC8P31273 242 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 RXRGP48443 463 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 PKNOX1P55347 436 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MAXP61244 160 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 DSG4Q86SJ6 1040 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 CIR1Q86X95 450 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 CCDC71Q8IV32 467 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 CLIP3Q96DZ5 547 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MYOCQ99972 504 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ZCCHC2Q9C0B9 1178 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ASAH2Q9NR71 780 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ARL15Q9NXU5 204 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 XPR1Q9UBH6 696 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MTRRQ9UBK8 725 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF225Q9UK10 706 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 HACD1B0YJ81 288 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 CABYRO75952 493 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 NUDT14O95848 222 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF14P17017 642 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 CAPGP40121 348 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 BRCC3P46736 316 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 FASTKQ14296 549 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 EIF2S3LQ2VIR3 472 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 TBRG1Q3YBR2 411 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM76BQ5HYJ3 339 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 SSX9Q7RTT3 188 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 DEPDC4Q8N2C3 294 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ATAD1Q8NBU5 361 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 UTP15Q8TED0 518 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM129BQ96TA1 746 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 SNRNP25Q9BV90 132 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 GANQ9H2C0 597 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 NXF3Q9H4D5 531 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 ALG9Q9H6U8 611 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 POLHQ9Y253 713 aa11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 MRPS23Q9Y3D9 190 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-202ENST00000348513 KPNA5O15131 536 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 THRBP10828 461 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 TM4SF1P30408 202 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GALEQ14376 348 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 KCNJ8Q15842 424 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 IL27RAQ6UWB1 636 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 POF1BQ8WVV4 589 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GOLGA2P5Q9HBQ8 144 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CDH9Q9ULB4 789 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 AP3M1Q9Y2T2 418 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 SIGLEC16A6NMB1 481 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 SPATA31C2B4DYI2 1134 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 FKTNO75072 461 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 SERPINE1P05121 402 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GNAZP19086 355 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 DDX6P26196 483 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GUCA1AP43080 201 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 TNK2Q07912 1038 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 HSPA14Q0VDF9 509 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ACSBG2Q5FVE4 666 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CLNKQ7Z7G1 428 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF420Q8TAQ5 688 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms