RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 HERC6Q8IVU3 1022 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 CLEC4FQ8N1N0 589 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 PTERQ96BW5 349 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 KIFC1Q9BW19 673 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 ALG2Q9H553 416 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 SYTL2Q9HCH5 934 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 PNPLA8Q9NP80 782 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 VPS45Q9NRW7 570 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 DDX18Q9NVP1 670 aaKnown RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 LMCD1Q9NZU5 365 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 CLEC4EQ9ULY5 219 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 SUFUQ9UMX1 484 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 TRBV23OR9-2A0A075B6M9 112 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 HSPA8P11142 646 aaKnown RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 PKMP14618 531 aaKnown RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 GSCP56915 257 aaPredicted RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 STX5Q13190 355 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 KRT33BQ14525 404 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 TBCELQ5QJ74 424 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 RANBP10Q6VN20 620 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 TRMT11Q7Z4G4 463 aaKnown RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 ZNF786Q8N393 782 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 RNF31Q96EP0 1072 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.296e-7■■□□□ 12.8
CASC4-202ENST00000345795 MAGED4Q96JG8 741 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 CROTQ9UKG9 612 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 NDUFAF1Q9Y375 327 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 POLR3HQ9Y535 204 aaPredicted RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 DPPA5A6NC42 116 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 SCNN1AP37088 669 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 ST8SIA6P61647 398 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 TRAF2Q12933 501 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 PRKG2Q13237 762 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 PARP15Q460N3 678 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 ASRGL1Q7L266 308 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 SPRED2Q7Z698 418 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 OR52B6Q8NGF0 335 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 MYO19Q96H55 970 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 TNFRSF12AQ9NP84 129 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 PKD2L2Q9NZM6 624 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 ANKRD66B4E2M5 251 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 E7ENX8 843 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 CAPN1P07384 714 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 HLA-DPA1P20036 260 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 IL10RBQ08334 325 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 OR4D1Q15615 310 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 LRRC23Q53EV4 343 aaPredicted RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 RABL3Q5HYI8 236 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 MRPL10Q7Z7H8 261 aaKnown RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 SYTL1Q8IYJ3 562 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 BRSK1Q8TDC3 778 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 NT5C3BQ969T7 300 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 IMP4Q96G21 291 aaKnown RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 EBPLQ9BY08 206 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 CAPN10Q9HC96 672 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 CSNK1G1Q9HCP0 422 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 PSMD13Q9UNM6 376 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 MRPS23Q9Y3D9 190 aaKnown RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 FAM155AB1AL88 458 aaPredicted RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 SAP18O00422 153 aaKnown RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 HNRNPCL1O60812 293 aaKnown RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 OAZ2O95190 189 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 FKBP9O95302 570 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 ZNF682O95780 498 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 ATP6V1B2P21281 511 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 MAP4P27816 1152 aaKnown RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 CLCQ05315 142 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 MGAT3Q09327 533 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 FAM45BPQ6NSW5 357 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 FKBP9P1Q75LS8 142 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 OR13J1Q8NGT2 312 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 FAM45AQ8TCE6 357 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 FOXJ1Q92949 421 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 TCEAL4Q96EI5 215 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 KLHL32Q96NJ5 620 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 ZBTB18Q99592 522 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 CLSTN3Q9BQT9 956 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 EFHD1Q9BUP0 239 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 GRIP2Q9C0E4 1043 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 SOX17Q9H6I2 414 aaPredicted RBP13.23□□□□□ -0.29
CASC4-202ENST00000345795 AKTIPQ9H8T0 292 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 COQ6Q9Y2Z9 468 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 DGKBQ9Y6T7 804 aa13.23□□□□□ -0.29
CASC4-202ENST00000345795 GRXCR1A8MXD5 290 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 ECI2O75521 394 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 PCDH8O95206 1070 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 TGDSO95455 350 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 MTPNP58546 118 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 SCAPQ12770 1279 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 XKR4Q5GH76 650 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 KIAA0930Q6ICG6 404 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms