RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SULT2A1Q06520 285 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 TAF10Q12962 218 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CBX3Q13185 183 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 DEPDC1Q5TB30 811 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 POC5Q8NA72 575 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 BORCS5Q969J3 196 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 SH3GL1Q99961 368 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 GMPPBQ9Y5P6 360 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 MAP1BP46821 2468 aaKnown RBP12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 TMEM247A6NEH6 219 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ARPC2O15144 300 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 PAGE2Q7Z2X7 111 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 TMEM135Q86UB9 458 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 RASAL3Q86YV0 1011 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ADHFE1Q8IWW8 467 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 VPS37AQ8NEZ2 397 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 OR9Q1Q8NGQ5 310 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CAPSLQ8WWF8 208 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 LZICQ8WZA0 190 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 RMND5AQ9H871 391 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 PRDM16Q9HAZ2 1276 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CRTAC1Q9NQ79 661 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 C3orf18Q9UK00 162 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 DERAQ9Y315 318 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 C5orf58C9J3I9 102 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 NIPSNAP2O75323 286 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 FADS2O95864 444 aaKnown RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF7P17097 686 aaPredicted RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 MSH3P20585 1137 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 JAK1P23458 1154 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 CPOXP36551 454 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 RUNX1T1Q06455 604 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 PPIL2Q13356 520 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 GRB7Q14451 532 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 SPDYE7PQ495Y7 208 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ZCCHC8Q6NZY4 707 aaKnown RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 NKAPQ8N5F7 415 aaKnown RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 SIDT2Q8NBJ9 832 aaKnown RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 LRRC58Q96CX6 371 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC25A51Q9H1U9 297 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 UBAP1Q9NZ09 502 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 TRPV2Q9Y5S1 764 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 MYO7AQ13402 2215 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 DDX60LQ5H9U9 1706 aaKnown RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ZCWPW2A0A1B0GU75 182 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 TCRBV5S1A1TA0A578 114 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 CDC7O00311 574 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 CYP2C18P33260 490 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 GSK3BP49841 420 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 UFM1P61960 85 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 HMGCS1Q01581 520 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 LCP2Q13094 533 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 PAFAH1B3Q15102 231 aaKnown RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF423Q2M1K9 1284 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 POM121L1PQ3SYA9 428 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 RSBN1Q5VWQ0 802 aaPredicted RBP12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF534Q76KX8 674 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 SPPL2BQ8TCT7 592 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 PAAF1Q9BRP4 392 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ATAD3AQ9NVI7 634 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 EBF1Q9UH73 591 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 SH3GLB1Q9Y371 365 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ASB3Q9Y575 518 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 MGAT4DA6NG13 374 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 ARL5CA6NH57 179 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 MLYCDO95822 493 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 THRBP10828 461 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 IL7RP16871 459 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 CASP9P55211 416 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 C1QTNF8P60827 252 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC2A7Q6PXP3 512 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 RRM2BQ7LG56 351 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 MAVSQ7Z434 540 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 MAGED4Q96JG8 741 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 MTMR10Q9NXD2 777 aa12.36□□□□□ -0.43
SNRNP48-201ENST00000342415 LRP5O75197 1615 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 PPP6CO00743 305 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 GRID2O43424 1007 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 RGS14O43566 566 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 RECQL5O94762 991 aaPredicted RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 SNAP29O95721 258 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 DUSP4Q13115 394 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 CRY1Q16526 586 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 CACYBPQ9HB71 228 aaKnown RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 IFT80Q9P2H3 777 aaPredicted RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 COQ6Q9Y2Z9 468 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 NUP205Q92621 2012 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 CNTN5O94779 1100 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 DEFA1P59665 94 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 DEFA3P59666 94 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 DGUOKQ16854 277 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 OGFRL1Q5TC84 451 aaPredicted RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 KIAA0930Q6ICG6 404 aaPredicted RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 ERI1Q8IV48 349 aaKnown RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 TERB1Q8NA31 727 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms