RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 KDELR3O43731 214 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 HSPA4LO95757 839 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 SERPINE1P05121 402 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 ARSAP15289 507 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 NNMTP40261 264 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 SULT2A1Q06520 285 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 COL9A2Q14055 689 aaPredicted RBP13.01□□□□□ -0.33
COL18A1-201ENST00000342220 TSTD2Q5T7W7 516 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 C16orf87Q6PH81 154 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 LILRA6Q6PI73 481 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CYS1Q717R9 158 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CHST9Q7L1S5 443 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 ACMSDQ8TDX5 336 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
COL18A1-201ENST00000342220 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 SLC30A1Q9Y6M5 507 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 DNAH14Q0VDD8 3507 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 IGLV3-10A0A075B6K4 115 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 LOC100653049A0A140TA62 436 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 HTR3EA5X5Y0 456 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 OR1I1O60431 355 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 ZMPSTE24O75844 475 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 KRT34O76011 436 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 RHOBTB1O94844 696 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CLDN7O95471 211 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 PROCP04070 461 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
COL18A1-201ENST00000342220 MMP2P08253 660 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 NCF2P19878 526 aaPredicted RBP13.01□□□□□ -0.33
COL18A1-201ENST00000342220 HOXC13P31276 330 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 HADHAP40939 763 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 GSTM4Q03013 218 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CDC16Q13042 620 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 KDELC1Q6UW63 502 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 TMEM135Q86UB9 458 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 SATL1Q86VE3 508 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 TMC8Q8IU68 726 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CEP97Q8IW35 865 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CHST14Q8NCH0 376 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 HIPK4Q8NE63 616 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 GANCQ8TET4 914 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 HSPBAP1Q96EW2 488 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 RBBP8Q99708 897 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 KXD1Q9BQD3 176 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 DCDC2Q9UHG0 476 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 AXIN1O15169 862 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 SRP72O76094 671 aaKnown RBP13.01□□□□□ -0.33
COL18A1-201ENST00000342220 NDST3O95803 873 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 GABRB3P28472 473 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CD97P48960 835 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 COPAP53621 1224 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 NAGLUP54802 743 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 MESP2Q0VG99 397 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 POTEHQ6S545 545 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 SFTPA1Q8IWL2 248 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 ALG9Q9H6U8 611 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 S100A14Q9HCY8 104 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 POLR3BQ9NW08 1133 aaPredicted RBP13.01□□□□□ -0.33
COL18A1-201ENST00000342220 CLDND1Q9NY35 253 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 SORCS3Q9UPU3 1222 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 PKP3Q9Y446 797 aa13.01□□□□□ -0.33
COL18A1-201ENST00000342220 MYO16Q9Y6X6 1858 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 LILRB3O75022 631 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 KLHL2O95198 593 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 MC4RP32245 332 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 PSMD7P51665 324 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 CCR3P51677 355 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 CREMQ03060 361 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
COL18A1-201ENST00000342220 RNF111Q6ZNA4 994 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 TSPAN33Q86UF1 283 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 YAF2Q8IY57 180 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 SLC26A7Q8TE54 656 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 TRMT2BQ96GJ1 504 aaKnown RBP13□□□□□ -0.33
COL18A1-201ENST00000342220 PSKH2Q96QS6 385 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 KIAA1522Q9P206 1035 aaPredicted RBP13□□□□□ -0.33
COL18A1-201ENST00000342220 COPG2Q9UBF2 871 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 INTS6Q9UL03 887 aaKnown RBP13□□□□□ -0.33
COL18A1-201ENST00000342220 ACOT9Q9Y305 439 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 MAGEB16A2A368 324 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 EPOPA6NHQ4 379 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 H3BNC9 293 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 H3BQ06 376 aaPredicted RBP13□□□□□ -0.33
COL18A1-201ENST00000342220 RALBP11234 206 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 POLR2EP19388 210 aaKnown RBP13□□□□□ -0.33
COL18A1-201ENST00000342220 CRABP2P29373 138 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 SERPINB8P50452 374 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 CYLC2Q14093 348 aaPredicted RBP13□□□□□ -0.33
COL18A1-201ENST00000342220 PTPRNQ16849 979 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 GRTP1Q5TC63 336 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 DPY19L3Q6ZPD9 716 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 PHTF2Q8N3S3 785 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 IRF7Q92985 503 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 ADGRE3Q9BY15 652 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 XPR1Q9UBH6 696 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 TTC34A8MYJ7 566 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 ZNF195O14628 629 aa13□□□□□ -0.33
COL18A1-201ENST00000342220 SCAMP1O15126 338 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms