RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 GBA3Q9H227 469 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 PIM2Q9P1W9 311 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 PTBP2Q9UKA9 531 aaKnown RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 PRKAB1Q9Y478 270 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 EFCAB9A8MZ26 197 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 C9IYK1 514 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 GJA9P57773 515 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 DET1Q7L5Y6 550 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 FAM83AQ86UY5 434 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 TXNDC5Q8NBS9 432 aaKnown RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 TOP1MTQ969P6 601 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 NRXN3Q9Y4C0 1643 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 hCG_2039718K7EN88 272 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 ATE1O95260 518 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 EIF2S1P05198 315 aaKnown RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 LMO2P25791 158 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 CLCQ05315 142 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 ZNF549Q6P9A3 640 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 TAS1R3Q7RTX0 852 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 SELENOMQ8WWX9 145 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 CENPIQ92674 756 aaPredicted RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 SENP8Q96LD8 212 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 BIRC8Q96P09 236 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 GBA2Q9HCG7 927 aaPredicted RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 MGAT4DA6NG13 374 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 DGKQP52824 942 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 OXCT1P55809 520 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC10A2Q12908 348 aaPredicted RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 TIMM50Q3ZCQ8 353 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 INTS11Q5TA45 600 aaKnown RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 ARMC8Q8IUR7 673 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 LILRA2Q8N149 483 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 ZNF778Q96MU6 729 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 KCNA7Q96RP8 456 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 RGS14O43566 566 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 ULK1O75385 1050 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 OR4F21O95013 312 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 CYBBP04839 570 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 CD97P48960 835 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 CLCN2P51788 898 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 IL18R1Q13478 541 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 NPTX1Q15818 432 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 VPS72Q15906 364 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 PYDC2Q56P42 97 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 DNAJB3Q8WWF6 145 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 YME1L1Q96TA2 773 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 SORT1Q99523 831 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 COPS4Q9BT78 406 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 MOCS1Q9NZB8 636 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 OPTCQ9UBM4 332 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 PRELID1Q9Y255 219 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 RICTORQ6R327 1708 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 C7orf72A4D263 438 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 SCAMP3O14828 347 aaKnown RBP12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 MSI1O43347 362 aaKnown RBP12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 COL6A1P12109 1028 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 KRT20P35900 424 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 PTPN9P43378 593 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 DCDC5Q6ZRR9 648 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 RAB43Q86YS6 212 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 NSMCE3Q96MG7 304 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 C4AP0C0L4 1744 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 C4BP0C0L5 1744 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC22A2O15244 555 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 POMCP01189 267 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 TSPAN19P0C672 248 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 POLD2P49005 469 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 FAM187BQ17R55 369 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC10A6Q3KNW5 377 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 SYPL2Q5VXT5 272 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 RAP1GAP2Q684P5 730 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 COLEC11Q9BWP8 271 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 PTGDR2Q9Y5Y4 395 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 NPEPPSL1A6NEC2 478 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 H3BMQ9 156 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 RRM2P31350 389 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 QPRTQ15274 297 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 ZSWIM7Q19AV6 140 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 RFX4Q33E94 735 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 ZNF773Q6PK81 442 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 KRT73Q86Y46 540 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 LZTR1Q8N653 840 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 CERKQ8TCT0 537 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 COG8Q96MW5 612 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 DHRS4Q9BTZ2 278 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 DCSTAMPQ9H295 470 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 NXF3Q9H4D5 531 aaKnown RBP12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
SSX2IP-201ENST00000342203 CROCCQ5TZA2 2017 aa12.46□□□□□ -0.42
SSX2IP-201ENST00000342203 LMO7Q8WWI1 1683 aa12.46□□□□□ -0.42
SSX2IP-201ENST00000342203 ELOVL7A1L3X0 281 aa12.46□□□□□ -0.42
SSX2IP-201ENST00000342203 MSCO60682 206 aa12.46□□□□□ -0.42
SSX2IP-201ENST00000342203 MLYCDO95822 493 aa12.46□□□□□ -0.42
SSX2IP-201ENST00000342203 UMPSP11172 480 aa12.46□□□□□ -0.42
SSX2IP-201ENST00000342203 EFNA1P20827 205 aaPredicted RBP12.46□□□□□ -0.42
SSX2IP-201ENST00000342203 ACADVLP49748 655 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms