RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 AP2A1O95782 977 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 GP1BAP07359 652 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 CELA2BP08218 269 aaPredicted RBP19.04■□□□□ 0.64
SYNE4-202ENST00000340477 LPOP22079 712 aaPredicted RBP19.04■□□□□ 0.64
SYNE4-202ENST00000340477 POLD2P49005 469 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 ITGA9Q13797 1035 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 LRP8Q14114 963 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 SPARCL1Q14515 664 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 DHRS13Q6UX07 377 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 MARK2Q7KZI7 788 aaKnown RBP19.04■□□□□ 0.64
SYNE4-202ENST00000340477 TAB3Q8N5C8 712 aaPredicted RBP19.04■□□□□ 0.64
SYNE4-202ENST00000340477 FAM46DQ8NEK8 389 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 GLYATL1Q969I3 302 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 WDR24Q96S15 920 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 SIRPGQ9P1W8 387 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 GULP1Q9UBP9 304 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 DRG1Q9Y295 367 aaKnown RBP19.04■□□□□ 0.64
SYNE4-202ENST00000340477 GOLGA6L10A0A0M3HER8 536 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 GLYATL1P3A0A0U1RQE8 302 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 CPED1A4D0V7 1026 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 GPR89AB7ZAQ6 455 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 PGRMC1O00264 195 aaKnown RBP19.03■□□□□ 0.64
SYNE4-202ENST00000340477 ATP1A1P05023 1023 aaKnown RBP19.03■□□□□ 0.64
SYNE4-202ENST00000340477 GPR89BP0CG08 455 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 SIX1Q15475 284 aaPredicted RBP19.03■□□□□ 0.64
SYNE4-202ENST00000340477 KCTD16Q68DU8 428 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 PPP1R21Q6ZMI0 780 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 NYAP1Q6ZVC0 841 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 KLHDC8BQ8IXV7 354 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 PDCD7Q8N8D1 485 aaKnown RBP19.03■□□□□ 0.64
SYNE4-202ENST00000340477 OR6C4Q8NGE1 309 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 GDAP1Q8TB36 358 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 IFI44Q8TCB0 444 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 BRSK1Q8TDC3 778 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 ZCCHC2Q9C0B9 1178 aaKnown RBP19.03■□□□□ 0.64
SYNE4-202ENST00000340477 ABCG4Q9H172 646 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 DPEP2Q9H4A9 486 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 ARNT2Q9HBZ2 717 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 IL17CQ9P0M4 197 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 ZNHIT2Q9UHR6 403 aa19.03■□□□□ 0.64
SYNE4-202ENST00000340477 ZNF106Q9H2Y7 1883 aaKnown RBP19.03■□□□□ 0.64
SYNE4-202ENST00000340477 ADCY8P40145 1251 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 BIRC2Q13490 618 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 OLIG2Q13516 323 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 GTF2H3Q13889 308 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 KCTD11Q693B1 232 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 FAM151BQ6UXP7 276 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 EFL1Q7Z2Z2 1120 aaKnown RBP19.02■□□□□ 0.64
SYNE4-202ENST00000340477 TMPRSS12Q86WS5 348 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 SLC35F3Q8IY50 421 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 DNAAF3Q8N9W5 541 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 KYQ8NBH2 561 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 DTX3LQ8TDB6 740 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 GPBAR1Q8TDU6 330 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 SCARF2Q96GP6 870 aaPredicted RBP19.02■□□□□ 0.64
SYNE4-202ENST00000340477 TTC25Q96NG3 672 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 VPS35Q96QK1 796 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 OSBPL9Q96SU4 736 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 RAB6BQ9NRW1 208 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 APPL1Q9UKG1 709 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 CNOT6Q9ULM6 557 aaKnown RBP19.02■□□□□ 0.64
SYNE4-202ENST00000340477 PADI4Q9UM07 663 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 ARL5AQ9Y689 179 aa19.02■□□□□ 0.64
SYNE4-202ENST00000340477 PTPRBP23467 1997 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 B4DGG1 531 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 BUD23O43709 281 aaKnown RBP19.01■□□□□ 0.63
SYNE4-202ENST00000340477 SPINK2P20155 84 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 HADHAP40939 763 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 ACTR1BP42025 376 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 ACTR1AP61163 376 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 CDH17Q12864 832 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 LAMB3Q13751 1172 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 SEPT6Q14141 434 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 SMAD1Q15797 465 aaKnown RBP19.01■□□□□ 0.63
SYNE4-202ENST00000340477 SLC30A9Q6PML9 568 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 RASGEF1CQ8N431 466 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 OR4K2Q8NGD2 314 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 MAPK15Q8TD08 544 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 OR2AG1Q9H205 316 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 ETNK1Q9HBU6 452 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 TRIM39Q9HCM9 518 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 IL26Q9NPH9 171 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 KLK13Q9UKR3 277 aa19.01■□□□□ 0.63
SYNE4-202ENST00000340477 TTC7AQ9ULT0 858 aaPredicted RBP19.01■□□□□ 0.63
SYNE4-202ENST00000340477 OAS3Q9Y6K5 1087 aaKnown RBP19.01■□□□□ 0.63
SYNE4-202ENST00000340477 ZFC3H1O60293 1989 aaKnown RBP19.01■□□□□ 0.63
SYNE4-202ENST00000340477 CES2O00748 559 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 GRID2O43424 1007 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 VEGFDO43915 354 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 TOP3BO95985 862 aaKnown RBP19■□□□□ 0.63
SYNE4-202ENST00000340477 MYF5P13349 255 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 GNG11P61952 73 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 CTBSQ01459 385 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 SEMA5AQ13591 1074 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 ATP13A5Q4VNC0 1218 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 PYCR3Q53H96 274 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 LDLRAP1Q5SW96 308 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 GUSBP11Q6P575 273 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 TMPRSS7Q7RTY8 843 aa19■□□□□ 0.63
SYNE4-202ENST00000340477 C19orf43Q9BQ61 176 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms