RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ITPRIPL1Q6GPH6 555 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 RFLNAQ6ZTI6 216 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 PID1Q7Z2X4 250 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 PEX26Q7Z412 305 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 TMC3Q7Z5M5 1100 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 C17orf82Q86X59 251 aaPredicted RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZNF567Q8N184 647 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 SNIP1Q8TAD8 396 aaKnown RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZNF578Q96N58 590 aaPredicted RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 HEMGNQ9BXL5 484 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 GPR63Q9BZJ6 419 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 TSGA10Q9BZW7 698 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 HACD3Q9P035 362 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 RAXQ9Y2V3 346 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 GPSM3Q9Y4H4 160 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 PCDHB1Q9Y5F3 818 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 ASXL3Q9C0F0 2248 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 A0A0U1RQS6 177 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 GOLGA6L9A6NEM1 432 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 D6RAR5 112 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 H7C0C1 242 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 RRP8O43159 456 aaKnown RBP13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 PPFIA2O75334 1257 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 ANXA9O76027 345 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 FUCA1P04066 466 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 FGF1P05230 155 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 HMGCLP35914 325 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 ATP5OP48047 213 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 POLD2P49005 469 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 WNT3AP56704 352 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 ERVPABLB-1P60509 514 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 GABREP78334 506 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 CTBSQ01459 385 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 LLGL1Q15334 1064 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 TBC1D25Q3MII6 688 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 PYCR3Q53H96 274 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 DOK6Q6PKX4 331 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 KDELC1Q6UW63 502 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 KDELC2Q7Z4H8 507 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZNF438Q7Z4V0 828 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 NRROSQ86YC3 692 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCNJLQ8IV13 435 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 TRAM1L1Q8N609 369 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 TTC13Q8NBP0 860 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 SPC24Q8NBT2 197 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCL4L1Q8NHW4 92 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 ACTL9Q8TC94 416 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 DTX3LQ8TDB6 740 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 FGF11Q92914 225 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 LIN37Q96GY3 246 aaPredicted RBP13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 GFM1Q96RP9 751 aaKnown RBP13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 WDR24Q96S15 920 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 AGAP2Q99490 1192 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 SPATA16Q9BXB7 569 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 FSD1LQ9BXM9 530 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 STRADBQ9C0K7 418 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 GBA3Q9H227 469 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 CARD9Q9H257 536 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 LRRN3Q9H3W5 708 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 LRIT1Q9P2V4 623 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 CNOT6Q9ULM6 557 aaKnown RBP13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 PCDHGA8Q9Y5G5 932 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 ENTPD2Q9Y5L3 495 aa13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 COL27A1Q8IZC6 1860 aaPredicted RBP13.23□□□□□ -0.29
SIRPB3P-201ENST00000340424 CHD6Q8TD26 2715 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 MACROD2A1Z1Q3 448 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 FADS2P1A8MWK0 482 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 INPP4BO15327 924 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 ASMTLO95671 621 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 RPLP0P05388 317 aaKnown RBP13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 PTMAP06454 111 aaKnown RBP13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 SLC2A4P14672 509 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCKBRP32239 447 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 ACTR1BP42025 376 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 GPR3P46089 330 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 GEMP55040 296 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 ACTR1AP61163 376 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 OTUD4Q01804 1114 aaKnown RBP13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 NR1D2Q14995 579 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 SLC30A9Q6PML9 568 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 LRRC69Q6ZNQ3 347 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 B4GALNT4Q76KP1 1039 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 SPRED1Q7Z699 444 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 PHYKPLQ8IUZ5 450 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 AVL9Q8NBF6 648 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 WDR36Q8NI36 951 aaKnown RBP13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 ALG3Q92685 438 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 TMEM159Q96B96 161 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 LRRC45Q96CN5 670 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 EID2BQ96D98 161 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 MRGPRX2Q96LB1 330 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 TMEM74Q96NL1 305 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 SUDS3Q9H7L9 328 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms